miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 138/154 (89%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 71 ataaatctagacac--atatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||||||| |||| ||| |||||| | |||||||||||||||| ||| |||||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||||||| |||||| ||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||| |||||||| ||||| || ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 71 ataaatctagac--acatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||||| | |||| ||| |||||| | ||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||||| ||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||||||| |||||||| |||||||||| ||||| || || ||||
Sbjct: 158 tatactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgt 99
Query: 69 taataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaata 128
|||| |||||||||| || | ||| |||||| | |||||||||||||||| ||| ||||
Sbjct: 98 taatgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggcaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||||||| |||||| ||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||| |||||||||||||| || ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| |||||||||||| || ||| |||||| | ||||||||| |||||||| |||| ||
Sbjct: 65 atgaatctagacacacatatgtctagattcattaacatctagatgaatataagcaatgct 124
Query: 131 aaaaagacttgcattataaaacggaggaagtata 164
| |||| ||| |||||| ||||||||| ||||||
Sbjct: 125 acaaagtcttacattatgaaacggagggagtata 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| |||||||| |||||||||||| ||| ||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 71 ataaatctaga--cacatatttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||||| ||||||| | | |||||| | |||||||||||||||| ||| ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagtata 164
||| |||| ||| |||||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtata 3
Score = 113 bits (57), Expect = 8e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||| ||||||||||||||| |||||||||||||||||| || ||| ||||| ||||
Sbjct: 3 tatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Query: 69 taataaatctagacacata--tttgtatagatttactaacatctatatgaatatggacaa 126
|||| |||||||| | ||| | ||| |||||| | |||||||||||||||| || |||
Sbjct: 63 taatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaa 122
Query: 127 tactaaaaagacttgcattataaaacggaggaagta 162
| |||||||| ||| |||||| ||||||||| ||||
Sbjct: 123 tgctaaaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
||||||||||||||||||||| |||||||||||| ||||| |||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 71 ataaatctagacacat--atttgtatagatttactaacatctatatgaatatggacaata 128
|| || ||||| | || || ||| |||||| | |||||||||||||||| ||||||||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagtata 164
|||||||| ||| |||| | ||||||||| ||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagggagtata 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||| ||| |||||||| ||| |||| || ||| ||||| ||||
Sbjct: 160 tatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgt 101
Query: 69 taataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaa 126
|||| |||||||||| || | | ||| || || | |||||||||||||||||||| |||
Sbjct: 100 taatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaa 41
Query: 127 tactaaaaagacttgcattataaaacggaggaagta 162
||||| |||| ||| ||||| ||||||||| ||||
Sbjct: 40 tactagaaagtcttatattatgaaacggagggagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
||||||||||||||||||||| |||||||||||| ||||| |||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 71 ataaatctagacacat--atttgtatagatttactaacatctatatgaatatggacaata 128
|| || ||||| | || || ||| |||||| | |||||||||||||||| ||||||||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagtata 164
|||||||| ||| |||| | ||||||||| ||||||
Sbjct: 38 ctaaaaagtcttacattgtgaaacggagggagtata 3
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||| ||| |||||||| ||| |||| || ||| ||||| ||||
Sbjct: 3 tatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgt 62
Query: 69 taataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaa 126
|||| |||||||||| || | | ||| || || | |||||||||||||||||||| |||
Sbjct: 63 taatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaa 122
Query: 127 tactaaaaagacttgcattataaaacggaggaagta 162
||||| |||| ||| ||||| ||||||||| ||||
Sbjct: 123 tactagaaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| |||||||| ||||||| |||| ||| ||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 71 ataaatctag--acacatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||| |||||||| | | |||||| | |||||||||||||||| ||| ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagtata 164
||| |||| ||| |||||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagtata 160
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||| ||||||||||||||| |||||||||||||||||| || ||| ||||| ||||
Sbjct: 160 tatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 101
Query: 69 taataaatctagacacata--tttgtatagatttactaacatctatatgaatatggacaa 126
|||| |||||||| | ||| | ||| |||||| | |||||||||||||||| || ||
Sbjct: 100 taatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaa 41
Query: 127 tactaaaaagacttgcattataaaacggaggaagta 162
| |||||||| ||| |||||| ||||||||| ||||
Sbjct: 40 tgctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| |||||||||||||||||||||||| ||||| | ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 71 ataaatctagacacat--atttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||| |||||| || ||| |||||| | ||||||||| |||||||||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
|||||||| ||| |||| | ||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| |||||||| ||||||||| |||||| || || ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 71 ataaatctagacaca--tatttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||||||| | ||| ||| |||||| | |||| |||||||| ||||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||| | ||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 121 bits (61), Expect = 3e-27
Identities = 137/162 (84%), Gaps = 4/162 (2%)
Strand = Plus / Minus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||||||||||||||||| || |||||||||||||||||| || ||| ||||| |||
Sbjct: 163 atatactccctccgtttcatattataagactttctagcattgcccacattcatatagatg 104
Query: 68 ttaataaatct----agacacatatttgtatagatttactaacatctatatgaatatgga 123
||||| ||||| | |||||||| | |||||||| | |||||||||||||||| |||
Sbjct: 103 ttaatgaatctatacacacacatatatatatagattcattaacatctatatgaatgtggg 44
Query: 124 caatactaaaaagacttgcattataaaacggaggaagtatat 165
|||| ||| |||| ||| | ||| |||||||||||||||||
Sbjct: 43 caatgctagaaagtcttataatatgaaacggaggaagtatat 2
Score = 97.6 bits (49), Expect = 5e-20
Identities = 134/162 (82%), Gaps = 4/162 (2%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||| ||||||||||||| || |||||||||||||||||| || ||| ||||| |||
Sbjct: 2 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 61
Query: 68 ttaataaatctagacacata----tttgtatagatttactaacatctatatgaatatgga 123
||||| |||||| | | ||| | |||||||||| | |||||||||||||||| |||
Sbjct: 62 ttaatgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtggg 121
Query: 124 caatactaaaaagacttgcattataaaacggaggaagtatat 165
|||| ||| |||| ||| | ||| ||||||||| |||||||
Sbjct: 122 caatgctagaaagtcttataatatgaaacggagggagtatat 163
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| |||||||||||||||||| ||||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| ||||||| | || ||| |||||| | |||||| ||||||||| |||||||| ||
Sbjct: 65 atgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgct 124
Query: 131 aaaaagacttgcattataaaacggaggaagta 162
| |||| ||| |||||| ||||||||||||||
Sbjct: 125 agaaagtcttacattatgaaacggaggaagta 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/152 (82%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||||||||||||||||| || ||| ||||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| ||||||||||| || | |||||| | ||||||| |||||||||| | |||| ||
Sbjct: 96 atgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaatgct 37
Query: 131 aaaaagacttgcattataaaacggaggaagta 162
| |||| ||| |||||| ||||||||| ||||
Sbjct: 36 agaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| |||||||||||| ||| || ||| ||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 71 ataaatctagacaca--tatttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||| ||||| ||| ||| |||||| | |||||||||||||||| | ||||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagtat 163
||| |||| ||| |||||| |||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtat 4
Score = 103 bits (52), Expect = 8e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| ||||||||||||||| ||||||||||||||||| | ||| ||||| |||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtt 63
Query: 70 aataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaat 127
||| |||||||||| |||| ||| | ||||| | |||||||||||||||| |||||||
Sbjct: 64 aatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaa 123
Query: 128 actaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||||| ||||||||| ||||
Sbjct: 124 cctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| || |||||||||||| | ||| |||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 71 ataaatctagacac--atatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||| ||||||| |||| ||| |||||| | |||||||||||||||||||| |||||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||| | ||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| |||||||||||| ||||| |||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 71 ataaatctagacacatat--ttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| ||| || ||| | |||||||||||||||||||| || ||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| ||| | ||||||||| ||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| |||||||||||| | ||| |||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 71 ataaatctagaca--catatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||| |||||| ||||| ||| |||||| | |||||||||||||||| ||| |||||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||| | ||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| |||||||||||| ||||| || ||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 71 ataaatctagacacatat--ttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| ||| || ||| | |||||||||||||||||||| || ||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||| | ||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 132/157 (84%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| |||||||||||||||||| || ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 71 ataaatctag--acacatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||| |||||||| ||| |||||| | || |||||||| ||| ||| |||
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagtatat 165
||| |||| ||| |||||| |||| ||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacagaggaagtatat 2
Score = 83.8 bits (42), Expect = 7e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||| |||| |||||||||| ||||||||||||| |||| || ||||||||| ||
Sbjct: 2 atatacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagata 61
Query: 68 ttaataaatctagacacatatttgt--atagatttactaacatctatatgaatatggaca 125
|||| |||||||||| |||| ||| |||||| | || ||| ||||||||| ||| ||
Sbjct: 62 ctaatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggca 121
Query: 126 atactaaaaagacttgcattataaaacggaggaagta 162
|| ||| |||| ||| |||||| ||||||||| ||||
Sbjct: 122 atgctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||||||| ||| | |||||||||| | |||||| ||||| ||||
Sbjct: 160 tatactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgt 101
Query: 69 taataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaa 126
|||| |||||||||||| || | ||| | ||| | ||||||||||||| || ||| |||
Sbjct: 100 taatgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaa 41
Query: 127 tactaaaaagacttgcattataaaacggaggaagta 162
| ||| || ||||| |||||| ||||||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 127/156 (81%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||| | |||||||||||| || || ||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 71 ataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaata 128
|| ||| |||| | | || ||| | ||||| | |||||||||||||||||||| |||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagtata 164
||| || ||||| |||||| ||||||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagtata 160
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| |||| |||||||||| ||||||||||||| |||| || ||| |||||||||||
Sbjct: 4 atacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtt 63
Query: 70 aataaatctag--acacatatttgtatagatttactaacatctatatgaatatggacaat 127
||| ||||||| |||||||| ||| |||||| | | | |||||||||||| ||| ||||
Sbjct: 64 aatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaat 123
Query: 128 actaaaaagacttgcattataaaacggaggaagta 162
|||||||| ||| |||||| |||| |||| ||||
Sbjct: 124 gctaaaaagtcttacattatgaaaccgagggagta 158
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||||||| ||||||||||||| ||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 71 ataaatctag--acacatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||| |||||||| | | |||||| | |||||||||| ||||| ||| ||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||||||| ||| |||| | ||||||||| ||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 91/110 (82%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| |||||||| || |||||| || ||| | ||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 71 ataaatctagacacata--tttgtatagatttactaacatctatatgaat 118
|| |||||||| | ||| | ||| |||||| | ||||||||||||||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 130/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||| ||| ||||||||||| |||||| || ||| ||||| |||
Sbjct: 160 tatactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgc 101
Query: 69 taataaatctagaca--catatttgtatagatttactaacatctatatgaatatggacaa 126
|||| |||||||||| ||| | |||||||||| || ||||||||||||| ||| ||
Sbjct: 100 taatgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaa 41
Query: 127 tactaaaaagacttgcattataaaacggaggaagta 162
| ||| |||| ||| |||||| ||||||||||||||
Sbjct: 40 tgctataaagtcttacattatgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| |||||||| ||||||| | || ||| ||||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 71 ataaatctagacacatatt--tgtatagatttactaacatctatatgaatatggacaata 128
||||||||| | | ||| | ||| |||||| | || ||||||||||||| ||| ||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagtata 164
|| |||| ||| |||| | ||||||||| ||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagtata 160
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||||||||||||||||| || |||||||||||||||||| || | | ||||| |||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtt 63
Query: 70 aataaatctagacac--atatttgtatagatttactaacatctatatgaatatggacaat 127
||| || ||| |||| |||| ||| |||||| | || ||||||||||||| ||| ||||
Sbjct: 64 aatgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaat 123
Query: 128 actaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| | ||| ||||||||||||||
Sbjct: 124 gctagaaagtcttataatatgaaacggaggaagta 158
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||| || |||||||||||||||||| || ||| ||||| ||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 71 ataaatctagac--acatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||||| | |||| ||||||| || | |||||||||||||| | ||| ||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagtat 163
||| |||| ||| | ||| ||||||||| |||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||||||||||||||||||||| || ||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 71 ataaatctagacac--atatttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||| |||| | || ||| || ||| | ||||||||| |||||| | | |||||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaata 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||||||| ||| |||| ||||||||||||||||
Sbjct: 38 ttaaaaagtcttacattgtaaaacggaggaagta 5
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||| || ||||||||||| |||||| || ||| |||||||||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 71 ataaatctagac--acatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||||| | |||| ||| |||||| | | ||||||||||||| |||||||||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaatt 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| | ||| ||||||||| ||||
Sbjct: 125 ctagaaagtcttataatatgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||| || |||||||||||| |||| ||| || ||||| |||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 71 ataaatctagacac--atatttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||| |||| |||| ||| |||||| | | |||| ||||||||| ||| ||||
Sbjct: 98 atgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
|| |||| ||| | ||| ||||||||||||||
Sbjct: 38 ttagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| |||||||||||||||||| | ||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 71 ataaatctagacac--atatttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||| | || |||| ||| |||||| | || ||||||| ||||| ||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||||| ||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| |||||||||||||||||| || ||| | ||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 71 ataaatctagacacatat--ttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||||||||||| | |||||||| | |||||||||||||||| || ||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||| | ||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
|||||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||
Sbjct: 138 atactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgtt 79
Query: 70 aataaatctagaca 83
||| ||||||||||
Sbjct: 78 aatgaatctagaca 65
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 17 ctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||| |||||||||||||||||| || ||||||||| ||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacatttatatagatgtta 64
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| | |||||||||||| |||||||||||| ||| |||| ||| |||||| |||||
Sbjct: 69 tagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacg 128
Query: 154 gag 156
|||
Sbjct: 129 gag 131
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||||||| |||||||||||||||||| || ||| ||||| ||||
Sbjct: 3 tatactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Query: 69 taataaatctagacaca 85
|||| ||| ||||||||
Sbjct: 63 taatgaatttagacaca 79
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||||| |||||||||||||||||| || ||| ||||| ||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||||||||||||| ||| |||| ||| |||| ||| |||||| ||||||||| ||||
Sbjct: 64 taacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Query: 163 ta 164
||
Sbjct: 4 ta 3
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||| || |||||||||||||||||| || ||| ||||||| ||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 64
Query: 71 ataaatctagaca 83
|| ||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattg 49
|||| ||||| ||||||| || |||||||||||||||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattg 90
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||| || |||||||||||||||||| || ||| ||||||| ||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 69
Query: 71 ataaatctagaca 83
|| ||||||||||
Sbjct: 68 atgaatctagaca 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattg 49
|||| ||||| ||||||| || |||||||||||||||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattg 43
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||||||||||||||| ||| |||||||||||||||||| || ||| || || ||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgct 100
Query: 70 aataaatctagacaca--tatttgtatagatttactaacatctatatgaatatggacaat 127
||| |||||||||| | ||| ||| |||||| | |||||| |||||| || ||| ||||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaat 40
Query: 128 actaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||| | ||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| |||||||||||||||||| || || ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 71 ataaatctagacacat--atttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||| |||||| || ||| |||||| | || |||||| |||||| ||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagtat 163
||| |||| ||| |||| | ||||||||| |||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 87.7 bits (44), Expect = 5e-17
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| |||| | || ||||||| ||| ||| ||||| ||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| |||||| || |||| ||| | |||| | ||||||||| |||||| ||| ||| ||
Sbjct: 96 atgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgct 37
Query: 131 aaaaagacttgcattataaaacggaggaagta 162
|||| ||||| |||| | ||||||||||||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 125/152 (82%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||| | || ||||||| | || ||| || || ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| |||| ||||| |||| || ||||||| | |||||||||||||||| || | ||| ||
Sbjct: 65 atgaatcaagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatgct 124
Query: 131 aaaaagacttgcattataaaacggaggaagta 162
|||| |||||||||||| ||||||||| ||||
Sbjct: 125 aaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| |||||||||||||||||| |||||| || || ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 71 ataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaata 128
|| |||||||||| || | |||| |||||| | ||||||| ||||| | ||| |||||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagtat 163
||| |||| ||| |||| | ||||||||| |||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtat 159
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||||||||||||||| ||| |||||||||||| ||||| || | |||| |||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 70 aataaatctagacacata--tttgtatagatttactaacatctatatgaatatggacaat 127
||| |||||| | ||||| | ||| |||||| | ||||||||| |||||||||| ||||
Sbjct: 99 aatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaat 40
Query: 128 actaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||| | ||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||| ||||||||||||| || |||||||||||||||||| || ||| ||||| |||
Sbjct: 129 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 70
Query: 68 ttaataaatctagaca 83
||||| ||||||||||
Sbjct: 69 ttaatgaatctagaca 54
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgc 50
|||||||||||||||||| || |||| |||||||||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgc 44
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| | |||||||||||||||| ||| |||| ||| |||| ||| | ||| |||||
Sbjct: 58 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 117
Query: 154 gaggaagtatat 165
||||||||||||
Sbjct: 118 gaggaagtatat 129
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| |||||||||||||||||| || ||| ||||| ||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 71 ataaatctagacacat 86
|| |||||| ||||||
Sbjct: 80 atgaatctatacacat 65
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 90 tgtatagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataa 149
|||||||||| | |||||||||||||||| ||| |||| ||| |||| ||| |||||| |
Sbjct: 68 tgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 127
Query: 150 aacggaggaagta 162
|||||||| ||||
Sbjct: 128 aacggagggagta 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 18 tccgtttcataatacaagactttctagcattgctcatatttatatatatgttaat 72
||||||||||||| |||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctacattcatatagatgttaat 66
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| |||| ||||||||||| ||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
||||||||||||||||||||| |||||||||||||||| | |||||| ||||| ||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 80 atgaatctaga 70
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||||||||||||||||| || ||| ||||| ||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 71 ataaatctagacaca 85
|||||||||||||||
Sbjct: 80 ataaatctagacaca 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||||| |||||||||||||||| |||||||| ||| |||| ||| |||| | |||||
Sbjct: 72 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacg 131
Query: 154 gaggaagta 162
|||| ||||
Sbjct: 132 gagggagta 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 7 catatactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 1 catatactccctccgtttcacaatgtaagactttttagcatt 42
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||| || ||||||||||||||||| || ||| | ||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 71 ataaatctagacaca 85
|||||||||||||||
Sbjct: 65 ataaatctagacaca 79
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 104 aacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagtat 163
||||||||||||||| |||||||| ||| |||| ||| | ||| |||||||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagtat 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattg 49
||||| ||||||||||||| || |||||||||||||||||
Sbjct: 138 atacttcctccgtttcatattataagactttctagcattg 99
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 91/106 (85%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 33 aagactttctagcattgctcatatttatatatatgttaataaatctag--acacatattt 90
|||||||||||||||||| |||||| |||||||||||||| ||||||| | |||||| |
Sbjct: 3 aagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatat 62
Query: 91 gtatagatttactaacatctatatgaatatggacaatactaaaaag 136
| |||||| | |||||||||||||||| ||| |||| ||| ||||
Sbjct: 63 gcctagattcattaacatctatatgaatgtgggcaatgctagaaag 108
Score = 61.9 bits (31), Expect = 3e-09
Identities = 88/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 33 aagactttctagcattgctcatatttatatatatgttaataaatctagacacata--ttt 90
|||||||||||||||||| || ||| ||||| |||||||| ||||||| || ||| | |
Sbjct: 112 aagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtat 53
Query: 91 gtatagatttactaacatctatatgaatatggacaatactaaaaag 136
| |||||| | |||||| ||||||||||||| |||| ||| ||||
Sbjct: 52 gcctagattcattaacatatatatgaatatgggcaatgctagaaag 7
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 7 catatactccctccgtttcataatacaagactttctagcattgctcatatttatatatat 66
|||||||||||||| ||||||||| ||||||||||||||||| || ||| ||||| ||
Sbjct: 1 catatactccctccatttcataatgtaagactttctagcattgtccacattcatatagat 60
Query: 67 gttaataaatctaga 81
|||||||||||||||
Sbjct: 61 gttaataaatctaga 75
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||||| |||||||||||||||| |||||||| ||| |||| ||| |||||| ||| |
Sbjct: 73 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatg 14
Query: 154 gaggaagtatatg 166
|||| ||||||||
Sbjct: 13 gagggagtatatg 1
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 7 catatactccctccgtttcataatacaagactttctagcattgc 50
|||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 128 catatactccctccgtttcataatgtaagactttctagcattgc 85
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| |||||||||||||||||| || || || || ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 71 ataaatctagacacat--atttgtatagatttactaacatctatatgaatatggacaata 128
||||||||||||| || || ||| |||||| | ||||||||| |||||| | ||||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaata 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||| | ||||||||||||||
Sbjct: 38 ctataaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| | || |||||||||||||||| | || ||| ||||||||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 71 ataaatctagacacatat 88
|| |||||||||| ||||
Sbjct: 72 atgaatctagacatatat 55
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||| ||||||||||||| || |||||||||||| ||| | || ||| ||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatatatatgt 62
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| |||||||||||||||||| || ||| ||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 71 ataaatctagaca 83
|||||||||||||
Sbjct: 74 ataaatctagaca 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||||| |||||||||||||||| ||| |||| ||| |||| ||| |||| | |||||
Sbjct: 66 tagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacg 125
Query: 154 gaggaagta 162
|||||||||
Sbjct: 126 gaggaagta 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatata 63
|||||||||||||||||| | ||||||||||||||||| ||| ||| |||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatata 57
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 128/155 (82%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||||||||||||||||||| ||||||||||| ||||| || | |||||| |||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctaccattgtccaca--tatatagatgtt 61
Query: 70 aataaatctagacacat--atttgtatagatttactaacatctatatgaatatggacaat 127
||| |||||||| |||| || | | |||||| | ||| ||||| || ||| ||||||||
Sbjct: 62 aatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaat 121
Query: 128 actaaaaagacttgcattataaaacggaggaagta 162
|||||||| ||| |||| | ||||||||||||||
Sbjct: 122 gctaaaaagtcttacattgtgaaacggaggaagta 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 124/155 (80%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| |||||||| |||||||| || |||||| || || |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 71 ataaatctagacaca--tatttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||||| | | ||| | | |||||| | |||||||||||| || ||||||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagtat 163
|| |||| ||| |||||| ||||||||| |||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| ||| | |||||| ||||| || ||| |||| || ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| ||||||| ||||||| ||| ||||| | |||||||||||||||| ||| |||| ||
Sbjct: 96 atgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgct 37
Query: 131 aaaaagacttgcattataaaacggaggaa 159
| || ||||| ||||| |||||||||||
Sbjct: 36 agaatgacttatattatgaaacggaggaa 8
Score = 69.9 bits (35), Expect = 1e-11
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 16 cctccgtttcataatacaagactttctagcattgctcatatttatatatatgttaataaa 75
|||||||||||||||| ||| | |||||||||||| || ||| ||||| |||||||| ||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 76 tctagacacatatttgtatagatttactaacatctatatgaatatggacaatactaaaaa 135
||| |||| |||| || |||||| | || ||||||| |||| ||| |||| ||| ||
Sbjct: 70 tctggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctagaat 129
Query: 136 gacttgcattataaaacggaggaagta 162
||||| ||| | ||||||||| ||||
Sbjct: 130 gacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 100/119 (84%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| || |||||||||||||||||| || ||| ||||||||||||
Sbjct: 158 tactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgtta 99
Query: 71 ataaatctag--acacatatttgtatagatttactaacatctatatgaatatggacaat 127
|| ||||| | ||| |||| ||| |||||||| |||||| ||||||||| ||| ||||
Sbjct: 98 atgaatcttggcacatatatatgtctagatttattaacatatatatgaatgtgggcaat 40
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| ||||||||||| || |||||||||| ||||||| || ||| |||||||||||
Sbjct: 4 atacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtt 63
Query: 70 aataaatctagacacatat 88
|||||||||||||| ||||
Sbjct: 64 aataaatctagacatatat 82
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 79.8 bits (40), Expect = 1e-14
Identities = 110/131 (83%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||||| || |||||||||||||||| | || ||| ||||| ||||
Sbjct: 3 tatactccctccgtttcatattataagactttctagcattacccacattcatatagatgt 62
Query: 69 t-aataaatctagacac--atatttgtatagatttactaacatctatatgaatatggaca 125
| ||| ||||||||||| | || | | |||||| | |||||||||||||||| ||| ||
Sbjct: 63 taaattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggca 122
Query: 126 atactaaaaag 136
|| ||| ||||
Sbjct: 123 atgctagaaag 133
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| | || |||||||||||||||||| || ||| ||||| ||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 99 atgaatctaga 89
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 79.8 bits (40), Expect = 1e-14
Identities = 101/121 (83%), Gaps = 4/121 (3%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
||||||||| |||||||| || |||||||||||| ||||| || ||| ||||| ||||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtta 64
Query: 71 ataaatctagacac----atatttgtatagatttactaacatctatatgaatatggacaa 126
|| |||||| |||| || | |||||||||| | |||||||||||||||| ||| |||
Sbjct: 65 atgaatctatacacacatatgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 127 t 127
|
Sbjct: 125 t 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 90 tgtatagatttactaacatctatatgaatatggacaatactaaaaag 136
|||||||||| | |||||||||||||||| ||| |||| ||| ||||
Sbjct: 77 tgtatagattcattaacatctatatgaatgtgggcaattctagaaag 31
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||||||||||||||||| || ||||||||||| |||||| || ||| ||||| ||| |
Sbjct: 139 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
Query: 70 aataaatctagacacatat 88
||| |||||||||| ||||
Sbjct: 79 aatgaatctagacatatat 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 110 tatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagtatat 165
||||||||| ||| |||||||| | || ||| | |||||||||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatactagatagtcttataatataaaacggaggaagtatat 2
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| ||||||||||||| ||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 71 ataaatctaga 81
|||||||||||
Sbjct: 85 ataaatctaga 75
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | |||||||||| | | ||| ||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 71 ataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaata 128
|| |||||||||||| || | ||| | ||| | |||||||||||| || ||| ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||||| ||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||| | |||||||||||| || || |||||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 71 ataaatctag--acacatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||| ||| | | || | ||| |||||| | |||||||||||||||| | | |||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||||| ||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 14 tccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||| |||||||||||||||||| || || |||||||||||
Sbjct: 8 tccctccgtttcataatataagactttctagcattgcccacatctatatatatgt 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||| | |||| ||||||||||| |||||| || || |||||| ||||||
Sbjct: 134 tactacctccgttttacaatataagactttctaacattgcccacatatatatagatgtta 75
Query: 71 ataaatctagacacatat 88
|| |||||| ||||||||
Sbjct: 74 atgaatctaaacacatat 57
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||| | |||||||| |||||| ||| |||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 71 ataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaata 128
|| |||||||| | || | | ||| ||||| | |||||||||||||||||| | ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||||| ||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | |||||||||||| ||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| |||| ||| |||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 71 ataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| | | |||||| | ||||||| |||||||||||| |||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||| | ||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||| | |||||||||| | |||||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 71 ataaatctag 80
|| |||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 77.8 bits (39), Expect = 4e-14
Identities = 90/106 (84%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 33 aagactttctagcattgctcatatttatatatatgttaataaatctag--acacatattt 90
|||||||||||||||||| || ||| ||||| |||||||| ||||||| ||||||| |
Sbjct: 112 aagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacat 53
Query: 91 gtatagatttactaacatctatatgaatatggacaatactaaaaag 136
|| |||||| | |||||| ||||||||| |||||||| ||| ||||
Sbjct: 52 gtctagattcattaacatatatatgaatgtggacaatgctagaaag 7
Score = 69.9 bits (35), Expect = 1e-11
Identities = 89/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 33 aagactttctagcattgctcatatttatatatatgttaataaatctagacacatatttgt 92
||||||||||||||||| || ||| |||||||||||||| |||||||||| ||| |||
Sbjct: 3 aagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgt 62
Query: 93 --atagatttactaacatctatatgaatatggacaatactaaaaag 136
|||||| | |||||||||||||||| ||| |||| ||| ||||
Sbjct: 63 gcctagattcattaacatctatatgaatgtgggcaatgctagaaag 108
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||| | |||||||| |||||| ||| |||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 71 ataaatctagacacatattt--gtatagatttactaacatctatatgaatatggacaata 128
|| |||||||| | || | | || |||||| | |||||||||||||||||| | ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||||| ||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | |||||||||||| ||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 71 ataaatctagac--acatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||||| | | || | | |||||| | ||||||| |||||||| || || |
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||||| ||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 77.8 bits (39), Expect = 4e-14
Identities = 90/106 (84%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 33 aagactttctagcattgctcatatttatatatatgttaataaatctagacacatatttgt 92
|||||||||||||||||| || ||| |||||||||||||| |||||||| | |||| |||
Sbjct: 3 aagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgt 62
Query: 93 --atagatttactaacatctatatgaatatggacaatactaaaaag 136
|||||| | |||||||||||||||| ||| |||| ||| ||||
Sbjct: 63 gcctagattcattaacatctatatgaatgtgggcaatgctagaaag 108
Score = 69.9 bits (35), Expect = 1e-11
Identities = 89/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 33 aagactttctagcattgctcatatttatatatatgttaataaatctagacacatatttgt 92
|||||||||||||||||| || ||| ||||| |||||||| ||||||| ||||||| | |
Sbjct: 112 aagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatat 53
Query: 93 a--tagatttactaacatctatatgaatatggacaatactaaaaag 136
| |||||| | |||||| ||||||||| ||| |||| ||| ||||
Sbjct: 52 atctagattcattaacatatatatgaatgtgggcaatgctagaaag 7
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| |||||| ||||||||| |||||||||||||||||| || || | ||| |||| |
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtca 99
Query: 71 ataaatctagacaca--tatttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||||||||| || ||||||||| | |||||||||||||||| | ||| |
Sbjct: 98 atgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgtaaacagtg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||||| ||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| |||||||||||||| || | | ||| ||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtta 64
Query: 71 ataaatctagacac--atatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||| |||| | || ||| |||||| | | |||||||| |||| ||| ||||
Sbjct: 65 atggatctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| ||||| || |||||||||||
Sbjct: 125 ctagaaagtcttatattatgaagcggaggaagta 158
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||||||||||| |||||| || | ||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtta 99
Query: 71 ataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| ||| | ||||| | ||||||||| |||||| ||| |||
Sbjct: 98 atgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| |||||||||| ||||||||||||||
Sbjct: 38 ctagaaagtcttgcattatgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||||||||||||||||| | || ||| || || ||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 71 ataaatctagacacatat 88
|| |||||| ||||||||
Sbjct: 65 atgaatctaaacacatat 82
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 75.8 bits (38), Expect = 2e-13
Identities = 95/112 (84%), Gaps = 4/112 (3%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgct--catatttatatatatgt 68
|||||||||||||||| ||| |||||||| |||||||||| |||| |||||||||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 69 taataaatctagacacat--atttgtatagatttactaacatctatatgaat 118
|||| |||||| |||||| || ||| |||||| | ||||||||| ||||||
Sbjct: 100 taatgaatctaaacacatacatatgtttagattcattaacatctaaatgaat 49
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
||||||||| |||||| ||| |||||||||||||||| | || ||| || || ||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 71 ataaatcta 79
|| ||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| |||||||||||||||||| || || ||||| ||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 71 ataaatctag 80
|| |||||||
Sbjct: 87 atgaatctag 78
Score = 71.9 bits (36), Expect = 3e-12
Identities = 122/152 (80%), Gaps = 9/152 (5%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||||||||||||||||||||| ||| | || ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| ||||||||||| |||||| | ||||||||||||| || ||| |||| ||
Sbjct: 65 atgaatctagacac---------tagattcattaacatctatatgtatgtgggcaatgct 115
Query: 131 aaaaagacttgcattataaaacggaggaagta 162
| |||| ||| |||||| ||||||||| ||||
Sbjct: 116 agaaagtcttacattatgaaacggagggagta 147
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
||||||||| |||||||||| |||||||||||||||||| || |||| ||| ||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 71 ataaatctagacacatat 88
|| |||||||| ||||||
Sbjct: 65 atgaatctagaaacatat 82
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgc 50
|||| ||||| ||||||||| ||||||||||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgc 91
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | |||||||||| |||||||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 71 ataaatctagacacatat 88
|| |||||||||| ||||
Sbjct: 65 atgaatctagacatatat 82
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 85 atatttgtatagatttactaacatctatatgaatatggacaatactaaaaagacttgcat 144
|||| ||| |||||| | ||||||| ||||||||||| ||| ||| || ||||| |||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacat 23
Query: 145 tataaaacggaggaagta 162
||| ||||||||| ||||
Sbjct: 22 tatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||||| ||||||| |||||||||||| ||| |||||| |||||||||| | |||||
Sbjct: 68 tagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacg 127
Query: 154 gaggaagtat 163
||||||||||
Sbjct: 128 gaggaagtat 137
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| ||||||||||| ||| |||| | || ||||||| | |||||| |||| |||||
Sbjct: 137 atacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 70 aataaatctagaca 83
||||||||||||||
Sbjct: 77 aataaatctagaca 64
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||||||| || ||||| ||||||||| || ||| ||||| ||||
Sbjct: 144 tatactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgt 85
Query: 69 taataaatctagacaca 85
|||| ||| ||||||||
Sbjct: 84 taatgaatttagacaca 68
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||||| |||||||||||||||||| || ||| ||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||||||||||||| ||| |||| |||||||| || |||||| ||||||||| ||||
Sbjct: 83 taacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggagggagta 142
Query: 163 ta 164
||
Sbjct: 143 ta 144
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 105 acatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||||||||||| ||| |||| ||| |||| ||| |||||| ||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||| |||||||||||||| || ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 71 ataaatctagaca 83
|| ||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| | |||||||||||||||| ||| |||| ||| |||||||| |||||| |||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacg 14
Query: 154 gaggaagta 162
|||||||||
Sbjct: 13 gaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatat 56
|||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 124 tatactccctccgtttcataatgtaagactttctagcattgcttatat 77
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||| ||||||||||||| || |||||||||||||||||| || ||| ||||| |||
Sbjct: 2 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 61
Query: 68 ttaataaatctag 80
|||| |||||||
Sbjct: 62 ttaacgaatctag 74
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||||||||||||| ||| |||| ||| |||| ||| | ||| ||||||||||||||
Sbjct: 64 taacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 5
Query: 163 tat 165
|||
Sbjct: 4 tat 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatat 64
|||| ||||| ||||| | || |||||||||||||||||| || ||| ||||||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcatatat 81
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
||||||||| |||||||||| ||||||||||||||||| || ||| ||||| ||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 71 ataaatctagaca 83
|| ||||||||||
Sbjct: 72 atgaatctagaca 60
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 105 acatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagtat 163
|||||||||||||| |||||||| ||| |||| ||| |||||| ||| |||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagtat 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| | |||||||||||||||| |||||||| ||| |||| ||| |||||| ||||
Sbjct: 64 tagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaaca 123
Query: 154 gaggaagta 162
|||| ||||
Sbjct: 124 gagggagta 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattg 49
||||| ||||| ||||||||| |||||||||||||||||
Sbjct: 4 atacttcctccttttcataatgtaagactttctagcattg 43
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| |||| |||||||| || ||||||||||||||||| || ||| ||||||||||||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcatatatatgtta 76
Query: 71 ataaatctagaca 83
|| ||||||||||
Sbjct: 75 atgaatctagaca 63
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
|||| |||||||||| || || |||||||||||||||| | || ||| |||||||||||
Sbjct: 5 tacttcctccgtttcttattataagactttctagcattacccacattcatatatatgtt 63
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 90 tgtatagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataa 149
|||||| ||||| ||||||| |||||||| |||| |||||||||| ||||| |||| | |
Sbjct: 77 tgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgtga 18
Query: 150 aacggaggaagta 162
|||||||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 14 tccctccgtttcataatacaagactttctagcattgctcatatttatatatatgttaata 73
||||||||||||||||| ||||||||||||||||| || ||| ||||| |||||||
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 74 aatctagacaca 85
||||||||||||
Sbjct: 45 aatctagacaca 34
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggagg 157
|||||||||||||||| |||||||| ||| |||| ||| |||||| |||||||||
Sbjct: 49 taacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacggagg 103
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 14 tccctccgtttcataatacaagactttctagcattgctcatatttatatatatgttaata 73
||||||||||||||||| |||||||||||||||| |||||| ||||| |||||||
Sbjct: 8 tccctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacg 67
Query: 74 aatctagacaca 85
||||||||||||
Sbjct: 68 aatctagacaca 79
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggagg 157
|||||||||||||||||||| ||| ||| |||| ||| |||||| |||||||||
Sbjct: 64 taacatctatatgaatatggttaatgctagaaagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatt 57
||||| ||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 4 atacttcctccgttttataatataagactttctagcattgctcatatt 51
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatata 65
|||| ||||||| |||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtccatattcatatata 51
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 110 tatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||||||||||||||| ||| |||| ||| ||||| | ||||||||||||
Sbjct: 53 tatatgaatatggacaatgctagaaagtcttatattatgagacggaggaagta 105
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| |||| |||||||| || |||||||||||||||||| || ||| ||||| ||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 71 ataaatctagacaca 85
|| |||||| |||||
Sbjct: 72 atgaatctaaacaca 58
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgc 50
|||||||||||||||||| || ||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgc 44
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||||||| ||| ||||||||||| || ||| ||||| ||||
Sbjct: 139 tatactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgt 80
Query: 69 taataaatctagaca 83
|||||||||||||||
Sbjct: 79 taataaatctagaca 65
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||||| |||||||||||||||| |||||||| ||| || |||| |||||| |||||
Sbjct: 69 tagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaacg 128
Query: 154 gaggaagtata 164
|||| ||||||
Sbjct: 129 gagggagtata 139
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | || ||||||||| || ||| ||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 71 ataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaata 128
|| |||||| ||| || | | || |||||| | ||||||||||||| |||||| ||
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||||| ||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||| | ||||||| || | ||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 71 ataaatctagacacata--tttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||||| | | | | ||| |||||| | || ||||||||||||| ||| ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
|||||| ||||| |||||| ||||||||| ||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| |||| |||||||| || |||||||||||||||||| || ||| ||||| ||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 71 ataaatctagacaca 85
|| |||||| |||||
Sbjct: 72 atgaatctaaacaca 58
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgc 50
|||||||||||||||||| || ||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgc 44
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| |||||||||||||||| | || ||| || || |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 71 ataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaata 128
|| |||||||||| | | | ||| ||||| | ||||||||||||| |||||||||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| |||| ||| |||| | ||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 71 ataaatcta 79
|| ||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 71 ataaatctagacacatattt--gtatagatttactaacatctatatgaatatggacaata 128
|| |||||||| | |||| | ||||||||| | ||||||| ||||||||||||| |||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||| | ||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| |||||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 71 ataaatctagac--acatatttgtatagatttactaacatctatatgaatatggacaata 128
|| |||||| || | |||||| | |||||| | ||||||| |||||||| ||| |||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||| | ||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
||||||||||||| || ||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| |||||||||| |||| ||| || ||| | ||||||| |||||||| | || ||| ||
Sbjct: 96 atgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgct 37
Query: 131 aaaaagacttgcattataaaacggaggaagtatat 165
| || ||||| |||| | ||||||||||||||||
Sbjct: 36 agaatgacttacattgtggaacggaggaagtatat 2
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
|||||||||||||| | ||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 108 tactccctccgttttacaatgtaagactttctagcattgctcatattcatatagatgtt 50
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 104 aacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||||||||||||||| |||| ||| |||| ||| |||| ||||||||||| ||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgtttcataatacaagactttctagcattg 49
||||||||||||||| || ||||||||||||||
Sbjct: 10 cctccgtttcataatgtaaaactttctagcattg 43
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 7 catatactccctccgtttcataatacaagactttctagcattgctcatatttatatatat 66
|||||||| ||||| ||||||||| ||| | |||||||||||| || ||| ||||| ||
Sbjct: 136 catatacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagat 77
Query: 67 gttaataaatctagacacatat 88
|||||| |||||||||| ||||
Sbjct: 76 gttaatgaatctagacatatat 55
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 7 catatactccctccgtttcataatacaagactttctagcattgctcatatttatatatat 66
|||||||||||||||||||||||| ||| | |||||||||| | ||||| ||||||||
Sbjct: 1 catatactccctccgtttcataatgtaagtcattctagcattacctatattcatatatat 60
Query: 67 gt 68
||
Sbjct: 61 gt 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 85 atatttgtatagatttactaacatctatatgaatatggacaatactaaaaagacttgcat 144
|||| ||| |||||| | |||||||||||||||| || |||| ||| || ||||| |||
Sbjct: 55 atatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacat 114
Query: 145 tataaaacggaggaagtatatg 166
||| ||| ||||||||||||||
Sbjct: 115 tatgaaatggaggaagtatatg 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 105 acatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagtata 164
|||| ||||||||||| | ||| ||| || ||||| |||||| ||||||||| ||||||
Sbjct: 62 acatatatatgaatataggtaatgctagaatgacttacattatgaaacggagggagtata 3
Query: 165 tg 166
||
Sbjct: 2 tg 1
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 124/153 (81%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 12 actccctccgtttcataatacaagactttctagcattgctcatatttatatatatgttaa 71
||||||||||||||||||| ||| | |||||||||| | || ||| |||| | ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 72 taaatctagacacatatttgtata--gatttactaacatctatatgaatatggacaatac 129
| |||||||||| |||| | |||| |||| |||||| ||||||||||||| | ||| |
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 130 taaaaagacttgcattataaaacggaggaagta 162
|| || ||||| |||||| ||||||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 119/149 (79%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | |||||||||| | ||||| ||||| | ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 71 ataaatc--tagacacatatttgtatagatttactaacatctatatgaatatggacaata 128
| |||| || | | |||| ||| |||||| |||||| || |||||||| ||| |||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 129 ctaaaaagacttgcattataaaacggagg 157
||| || ||||| |||||| |||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||||||||||||||||||| ||| | |||||||||| |||||||| ||||| |||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 70 aataaatcta 79
| | ||||||
Sbjct: 64 agtgaatcta 73
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| |||||||||||||| |||||| ||| ||| || ||||| |||||| |||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 154 gaggaagtat 163
|||| |||||
Sbjct: 13 gagggagtat 4
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 124/153 (81%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| |||||||| ||||| | | || || ||| | ||||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| |||||| | ||||| ||| |||||| | ||||||||| |||||| ||| ||| ||
Sbjct: 94 atgaatctaaatacata--tgtctagattcattaacatctaaatgaatgtgggcaacgct 37
Query: 131 aaaaagacttgcattataaaacggaggaagtat 163
| |||| ||| |||| | |||||||||||||||
Sbjct: 36 acaaagtcttacattgtgaaacggaggaagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| ||||||||||| ||| |||||||| |||| |||| || ||| || || |||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 70 aataaatctagaca 83
||| ||||||||||
Sbjct: 64 aatgaatctagaca 77
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 16 cctccgtttcataatacaagactttctagcattgctcatatttatatatatgttaataaa 75
||||||||||||||| ||| | |||||||||| |||| |||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 76 tctag 80
|||||
Sbjct: 70 tctag 74
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| |||||| |||| ||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 71 ataaatctagac 82
|| |||||||||
Sbjct: 85 atgaatctagac 74
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| ||||||||||| ||||| || ||| || || ||||||
Sbjct: 124 tactccctccgtttcacaatataagactttctaatattgcacacattcatttagatgtta 65
Query: 71 ataaatcta 79
|||||||||
Sbjct: 64 ataaatcta 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 107 atctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||| |||||| ||| |||| |||||||| ||| |||||||||||||| ||||||
Sbjct: 60 atctaaatgaatgtgggcaatgctaaaaagtcttacattataaaacggatgaagta 5
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| |||||||||||||||| | || || ||||| ||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 71 ataaatcta 79
|| ||||||
Sbjct: 76 atgaatcta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| |||||||||||||||| | || || ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 71 ataaatcta 79
|| ||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatata 63
|||||||||||||||||| || |||||||||||||||||| || ||| |||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgc 50
|||| ||||||||||||| || ||||||||||||||||||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcattgc 65
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||| |||| ||| | |||||||||| ||| |||||||| |||
Sbjct: 160 tatactccctccgtttcacaatataagccattctagcatttttcacatttatattgatga 101
Query: 69 taataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaa 126
|||| |||||||||| |||| | || |||||| | |||||| |||||||| ||| ||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaa 41
Query: 127 tactaaaaagacttgcattataaaacggaggaagta 162
| ||| || ||||| ||| | ||||||||||||||
Sbjct: 40 tgctacaatgacttatattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| |||| ||| | || ||||||| | || ||| |||| |||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatata 63
||||||||||||||||||||||| |||||||| |||||| | ||||||||||||
Sbjct: 2 atatactccctccgtttcataatgtaagactttttagcatcgtccatatttatata 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 109 ctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||| ||||||||| ||||||||||| ||| ||||| |||||||||||||
Sbjct: 60 ctatataaatatggacgatactaaaaagtcttatattatggaacggaggaagta 113
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatata 63
||||||||||||||||||| |||| |||||||| |||||| | ||||||||||||
Sbjct: 2 atatactccctccgtttcacaatataagactttttagcatcgtccatatttatata 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 109 ctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||| ||||| ||| || ||||||| ||| |||||| ||||||||||||||
Sbjct: 60 ctatataaatatagacgatgctaaaaaatcttacattatgaaacggaggaagta 113
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 84 catatttgtatagatttactaacatctatatgaatatggacaatactaaaaagacttgca 143
||||||||| |||||| | ||||||| |||||||| || ||||||| || ||||| ||
Sbjct: 83 catatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttaca 24
Query: 144 ttataaaacggaggaagtat 163
|||| |||||||||||||||
Sbjct: 23 ttatgaaacggaggaagtat 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| ||||||||||||||| ||| | |||||| ||| |||| ||| |||| |||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 70 aataaatctagacacatat 88
||| |||||||||| ||||
Sbjct: 64 aatgaatctagacaaatat 82
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||| ||| |||| ||||||||||||| || || || ||| ||||
Sbjct: 3 tatactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgt 62
Query: 69 taataaatcta 79
|||| ||||||
Sbjct: 63 taatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctca 53
|||| |||||||| || |||| |||||||||||||||| ||||
Sbjct: 138 tacttcctccgttccacaatataagactttctagcattactca 96
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 17 ctccgtttcataatacaagactttctagcattgctcatatttatata 63
|||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccatattcatata 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 106 catctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||||||||||||| |||| ||| |||| ||| |||||| |||||||| |||||
Sbjct: 61 catctatatgaatatgggcaatgctagaaagtcttacattatgaaacggagaaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagca 46
|||||||||||||||| ||| ||||||||||||||
Sbjct: 98 tactccctccgtttcacaatgtaagactttctagca 63
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatt 57
|||| ||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattgcccatatt 68
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattg 49
|||||||||||||||||| || |||||||||||| ||||
Sbjct: 5 tactccctccgtttcatactataagactttctagtattg 43
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| || ||| |||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 71 ataaatctagac--acatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||||| | |||| || |||||| | || ||||||||||||| ||||||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||| | |||| | ||||||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 101/126 (80%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 39 ttctagcattgctcatatttatatatatgttaataaatctagacacatattt--gtatag 96
||||||||||| || ||| ||||| ||| |||| ||||||| || |||| | || |||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtctag 92
Query: 97 atttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacggag 156
||| | ||||||| |||||||| |||| ||| ||| || ||||| |||| | ||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 157 gaagta 162
| ||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctca 53
|||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcattgctca 41
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 133 aaagacttgcattataaaacggaggaagtatat 165
|||||||| |||||| |||||||||||||||||
Sbjct: 34 aaagacttacattatgaaacggaggaagtatat 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagc 45
||||||| ||||||||||||||| ||| |||||||||
Sbjct: 2 atatacttcctccgtttcataatgtaagtctttctagc 39
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 61.9 bits (31), Expect = 3e-09
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| ||| | || ||||||| | |||||| |||| ||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 71 ataaatctagacacatatttgtatagatttactaacatc 109
|| |||||||||| |||| | | |||||| | |||||||
Sbjct: 89 atgaatctagacatatatctatctagattcattaacatc 51
Score = 60.0 bits (30), Expect = 1e-08
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 65 atgttaataaatctagacacatatttgtatagatttactaacatctatatgaatatggac 124
|||||||| |||||||| | |||| ||| |||||| | ||||||| ||||||||||||
Sbjct: 52 atgttaatgaatctagatagatatatgtctagattcattaacatcaatatgaatatggga 111
Query: 125 aatactaaaaagacttgcattataaaacggaggaagta 162
||| |||||| ||||| ||| | ||||||||| ||||
Sbjct: 112 aatgctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 127/158 (80%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 7 catatactccctccgtttcataatacaagactttctagcattgctcatatttatatatat 66
|||||||||||||||||||| ||| ||| | |||||| ||| | || ||| |||| |
Sbjct: 162 catatactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgtt 103
Query: 67 gttaataaatctagacacatatttgtat--agatttactaacatctatatgaatatggac 124
|||||| |||||||||| |||| | ||| ||||| | ||||||| ||||| || ||||
Sbjct: 102 gttaatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaa 43
Query: 125 aatactaaaaagacttgcattataaaacggaggaagta 162
||| ||| || ||||| |||| | ||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 93 atagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaac 152
||||||| | ||||||| |||||||| |||| ||| ||| || ||||| |||||| ||||
Sbjct: 74 atagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaac 15
Query: 153 ggaggaagta 162
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatat 56
|||||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaatactttatagcattgctcatat 50
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||||| || ||||||||||||||| ||||| ||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 71 ataaatctagacacata 87
|| ||| || |||||||
Sbjct: 77 atgaatttaaacacata 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||||||||| ||||| |||| |||||| | ||| |||| | ||||||||||||||
Sbjct: 78 taacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 60.0 bits (30), Expect = 1e-08
Identities = 81/97 (83%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 33 aagactttctagcattgctcatatttatatatatgttaataaatctag--acacatattt 90
|||||||||||||||||| || ||| |||| |||| |||| ||||||| |||||||| |
Sbjct: 6 aagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacatatat 65
Query: 91 gtatagatttactaacatctatatgaatatggacaat 127
|| |||||| | | ||||||||||||| ||| ||||
Sbjct: 66 gtctagattcatttgcatctatatgaatgtgggcaat 102
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 93 atagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaac 152
||||||| | ||||||| |||||||| |||| ||| ||| || ||||| |||||| ||||
Sbjct: 74 atagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaac 15
Query: 153 ggaggaagta 162
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||| || |||||||||||||||| | |||||| ||||| ||| ||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattacccatattcatatagatgata 55
Query: 71 at 72
||
Sbjct: 54 at 53
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgc 50
||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 4 atactccctccgtttcatattataagactttctaacattgc 44
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatat 56
|||||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 137 tactccctccgtttcataatgtaatactttatagcattgctcatat 92
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||||| || ||||||||||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 71 ataaatctagacacata 87
|| ||| || |||||||
Sbjct: 65 atgaatttaaacacata 81
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||||||||| ||||| |||| |||||| | ||| |||| | ||||||||||||||
Sbjct: 64 taacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| | ||||||| |||||||||||| ||| ||| || ||||| |||||| |||||
Sbjct: 72 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacg 131
Query: 154 gaggaagtat 163
||||||||||
Sbjct: 132 gaggaagtat 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| ||||||||||||||| ||| | |||||||||| | |||||| |||| |||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 70 aataaatctaga 81
||| ||||||||
Sbjct: 81 aatgaatctaga 70
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | |||||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | |||||| |||| ||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 71 ataaatctagaca 83
|| ||||||||||
Sbjct: 79 atgaatctagaca 67
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 113 atgaatatggacaatactaaaaagacttgcattataaaacggaggaagtat 163
|||||||||| ||| ||| || ||||| |||||| |||||||||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 89 ttgtatagatttactaacatctatatgaatatggacaatactaaaaagacttgcattata 148
|||| |||||| | ||||||| |||||||||||| ||| ||| || ||||| |||| |
Sbjct: 66 ttgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtg 125
Query: 149 aaacggaggaagta 162
||||||||| ||||
Sbjct: 126 aaacggagggagta 139
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 58.0 bits (29), Expect = 4e-08
Identities = 123/153 (80%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 71 ataaatctagacacatatttgta-tagatttactaacatctatatgaatatggacaatac 129
|| |||||| ||| || | ||| |||||| | ||||||| |||||||| ||| ||| |
Sbjct: 97 atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 130 taaaaagacttgcattataaaacggaggaagta 162
|| || ||||| |||| | ||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 122/153 (79%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 ataaatctag-acacatatttgtatagatttactaacatctatatgaatatggacaatac 129
|| ||||||| ||| | || ||| |||||| | ||||||| |||||||| ||| ||| |
Sbjct: 65 atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 130 taaaaagacttgcattataaaacggaggaagta 162
|| || ||||| |||| | ||||||||| ||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 106 catctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||| ||||||||||| | |||||||||| ||||| |||||| ||||||||| ||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||| ||||||||||||| ||| || || ||||| |||| | ||||||||||||||
Sbjct: 64 taacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggaggaagta 5
Query: 163 tat 165
|||
Sbjct: 4 tat 2
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | |||||||||| |||||||| |||| || |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 71 ataaatcta 79
|| ||||||
Sbjct: 66 atgaatcta 58
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 85 atatttgtatagatttactaacatctatatgaatatggacaatactaaaaagacttgcat 144
|||| ||| |||||| | ||||||||| |||||| |||| ||| ||| |||| ||| |||
Sbjct: 82 atatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacat 23
Query: 145 tataaaacggaggaagtatat 165
| | |||||||||||||||||
Sbjct: 22 tgtgaaacggaggaagtatat 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||| ||||||||||| ||| |||||||||||||||| || ||| || || |||
Sbjct: 2 atatacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatg 61
Query: 68 ttaataaatctagacacatat 88
||||| |||||||||| ||||
Sbjct: 62 ttaatgaatctagacatatat 82
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | |||||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 71 ataaatctagaca 83
|| ||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 113 atgaatatggacaatactaaaaagacttgcattataaaacggaggaagtat 163
|||||||||| ||| ||| || ||||| |||||| |||||||||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 89 ttgtatagatttactaacatctatatgaatatggacaatactaaaaagacttgcattata 148
|||| |||||| | ||||||| |||||||||||| ||| ||| || ||||| |||| |
Sbjct: 78 ttgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtg 19
Query: 149 aaacggaggaagta 162
||||||||| ||||
Sbjct: 18 aaacggagggagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||| ||||||||||| ||| ||| | |||||||||| | || |||||||| |||
Sbjct: 2 atatacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatg 61
Query: 68 ttaataaatctagacacatat 88
||||| |||||||||| ||||
Sbjct: 62 ttaatgaatctagacatatat 82
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| | ||||||| |||||||| |||| |||||||||| ||||| ||| | |||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 154 gaggaagta 162
|||||||||
Sbjct: 122 gaggaagta 130
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 74/88 (84%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 33 aagactttctagcattgctcatatttatatatatgttaataaatctagacac--atattt 90
||||||||||||||| | || ||| ||||| |||||||| ||||||||||| |||| |
Sbjct: 3 aagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatatat 62
Query: 91 gtatagatttactaacatctatatgaat 118
|| |||||| | | ||||||||||||||
Sbjct: 63 gtctagattcatttacatctatatgaat 90
Score = 50.1 bits (25), Expect = 1e-05
Identities = 73/88 (82%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 33 aagactttctagcattgctcatatttatatatatgttaataaatctagac--acatattt 90
||||||||||||||| | || ||| ||||| |||| ||| ||||||||| | |||| |
Sbjct: 112 aagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatgt 53
Query: 91 gtatagatttactaacatctatatgaat 118
|| |||||| | ||||||||||||||||
Sbjct: 52 gtctagattcattaacatctatatgaat 25
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||| |||||||| |||| | | |||||| ||||| |||||| ||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||| ||||||||||| |||| ||| | || ||||||| ||||||||||||| |||
Sbjct: 125 atatacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatg 66
Query: 68 ttaa 71
||||
Sbjct: 65 ttaa 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | || ||||||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 71 a 71
|
Sbjct: 65 a 65
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 94/114 (82%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| ||| |||||||| ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatt--tcacatttatattgatgtta 99
Query: 71 ataaatctagacacatattt--gtatagatttactaacatctatatgaatatgg 122
||||||||| | | |||| | || |||||| | ||||||| ||||||||||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgg 45
Score = 54.0 bits (27), Expect = 6e-07
Identities = 87/106 (82%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | ||| |||||| | |||||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 71 ataaatctagac--acatatttgtatagatttactaacatctatat 114
|| ||||||||| | |||| | |||||||||| ||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatat 110
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 7 catatactccctccgtttcataatacaagactttctagcattgc 50
|||||||| ||||||||||| ||| ||||||||||||||||||
Sbjct: 143 catatacttcctccgtttcacaatgtaagactttctagcattgc 100
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| | ||||||||| |||||| ||| |||| ||| |||| ||| |||| | |||||
Sbjct: 72 tagattcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattgtgaaacg 130
Query: 154 gaggaagtatatg 166
|||||||||||||
Sbjct: 131 gaggaagtatatg 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 7 catatactccctccgtttcataatacaagactttctagcattg 49
|||||||| ||||||||||| ||| ||| |||||||||||||
Sbjct: 1 catatacttcctccgtttcacaatctaagcctttctagcattg 43
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 124/155 (80%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| ||| | |||||||||| ||||| |||| ||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 71 ataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| | || |||| | | ||||||| ||| |||| |||| |||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagtat 163
||| || ||||| |||| | |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 124/155 (80%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 71 ataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| | || || ||||| ||| || |||||||| |||| |||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagtat 163
||| || ||||| |||| | ||||||||| |||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||| ||||||||||||| ||| ||| || ||||| |||| | ||||||||||||||
Sbjct: 64 taacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 105 acatctatatgaatatggacaatactaaaaagacttgcattataaaacggag 156
||||| ||||||||||||| ||| ||| || ||||| |||||| ||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 2e-07
Identities = 73/87 (83%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 41 ctagcattgctcatatttatatatatgttaataaatctagacacatatttgtatagattt 100
|||||||||| || ||| |||||||||||||| ||||||| | |||| ||| ||||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctag--atatatatgtctagattc 33
Query: 101 actaacatctatatgaatatggacaat 127
| |||||| ||||||||| ||| ||||
Sbjct: 32 attaacatatatatgaatgtgggcaat 6
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 45 cattgctcatatttatatatatgttaataaatctagacacatat 88
|||||| || ||| |||||||||||||| |||||||||| ||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctagacatatat 48
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 107 atctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||||||||| | |||||| ||| || ||||| |||||| ||||||||||||||
Sbjct: 81 atctatatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | ||||| ||||| ||||| ||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 71 ataaatctagac 82
|| |||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgc 50
|||| ||||||||||||| || ||||||||||||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgc 48
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 94/114 (82%), Gaps = 4/114 (3%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| ||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt--tcacatttatattgatgtta 62
Query: 71 ataaatc--tagacacatatttgtatagatttactaacatctatatgaatatgg 122
||||||| || | | |||| ||| |||||| | ||||||| ||||||||||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgg 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 87/106 (82%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | ||| |||||| | |||||| |||| ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 71 ataaatctagac--acatatttgtatagatttactaacatctatat 114
|| ||||||||| | |||| | |||||||||| ||||||| ||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatat 51
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||||||||| ||| | ||||||||||
Sbjct: 4 atactccctccgtttcataatataagtcattctagcatt 42
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | ||||| |||| | ||||||||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 97 atgaatctaga 87
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| |||| ||| | |||||| ||| ||||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 104 aacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||| ||||||||||||| ||| ||| || ||||| |||| | ||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 ataaatctagacacatattt--gtatagatttactaacatctatatgaatatggacaata 128
|| |||||||| | |||| | || || ||| | ||||||| |||||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
|| || ||||| |||| | ||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | || ||||||| | || ||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 71 ataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| | || |||||| | |||||| |||||||| ||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
|||||| ||||| ||| | ||||||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| |||| ||| | || ||||||| | || ||| |||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 71 ataaatctag--acacatatttgtatagatttactaacatctatatgaatatggacaata 128
|| ||||||| | | |||| ||| |||||| | ||||||| |||||||| ||| |||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||| | ||||||||| ||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| || ||| |||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 71 ataaatctagacacatatttgtat--agatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| | ||| ||||| | ||||| |||||||| ||| |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
|||||| ||||| |||| | ||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| |||| ||| | |||||||||| |||| ||| |||| ||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 67 atgaatctaga 57
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 14 tccctccgtttcataatacaagactttctagcattgctcatatttatatatatgttaata 73
||||||||||||| ||| ||| | |||||||||| |||| ||| |||| ||||| |||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 74 aatctagaca 83
||||||||||
Sbjct: 75 aatctagaca 66
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| ||||||||||| ||| ||| | || ||||||| ||||||||||||| ||| |
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgct 63
Query: 70 aataaatctagaca 83
||| ||||||||||
Sbjct: 64 aatgaatctagaca 77
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 105 acatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||| ||||||||||||| ||| ||| || ||||| |||| | ||||||||||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttat 60
|||| ||||| ||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 5 tacttcctccatttcataatgtaagactttctagcattgttcacatttat 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgc 50
||||||| | ||||||||| ||| ||||||||||||||||||
Sbjct: 129 atatacttcatccgtttcacaatgtaagactttctagcattgc 87
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || |||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 71 ataaatctagacacatat 88
|| |||||||||| ||||
Sbjct: 65 atgaatctagacatatat 82
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||||||||||||||||||| ||| | |||||||||| || ||| |||| |||
Sbjct: 2 atatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatg 61
Query: 68 ttaataaatctagacacatatttgta--tagatttactaacatctatatgaatatggaca 125
||| |||||||||| |||| | || |||||| | || |||| ||||| || || |||
Sbjct: 62 ccaatgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaaca 121
Query: 126 atactaaaaagacttgcattataaaacggaggaagta 162
||| || || ||||| |||||| ||||||||| ||||
Sbjct: 122 atagtagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||||| || ||||||||| ||||||
Sbjct: 130 tactccctccgtttcatactataagactttcaagcatt 93
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||||||||||||||| ||| ||| | |||||| ||| |||||||||||| |||
Sbjct: 2 atatactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatg 61
Query: 68 ttaataaatctaga 81
|||| ||||||||
Sbjct: 62 ctaatgaatctaga 75
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||||||||||||||||||| ||| | |||||||||| || ||| |||| |||
Sbjct: 2 atatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatg 61
Query: 68 ttaataaatctagac--acatatttgtatagatttactaacatctatatgaatatggaca 125
||| ||||||||| | |||||| | |||||| | || |||| ||||| || || | |
Sbjct: 62 ccaatgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaa 121
Query: 126 atactaaaaagacttgcattataaaacggaggaagta 162
|||||| || ||||| |||||| ||||||||| ||||
Sbjct: 122 atactagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||||| || |||||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttatagcatt 42
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||| ||||||||||||| || ||||||||||||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcatt 77
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatata 65
||||||||||||||||||| ||| ||| | |||||||||| | || |||||||||||
Sbjct: 2 atatactccctccgtttcacaatgtaagtcattctagcatttcccacatttatatata 59
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 125/157 (79%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||||||||||||||| || ||| | || | ||||| | || |||||||| |||
Sbjct: 2 atatactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatg 61
Query: 68 ttaataaatctagacacatatttgtat--agatttactaacatctatatgaatatggaca 125
|| || |||||||||| |||||| ||| ||||| | ||||||| |||| ||| ||| |
Sbjct: 62 tttatgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaa 121
Query: 126 atactaaaaagacttgcattataaaacggaggaagta 162
|| |||||| ||||| | || | ||||||||||||||
Sbjct: 122 atgctaaaatgacttactttgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 125 aatactaaaaagacttgcattataaaacggaggaagtatat 165
||||||| || |||||||||| | |||||||||||||||||
Sbjct: 71 aatactagaatgacttgcattgtgaaacggaggaagtatat 111
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 124/156 (79%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||||||||||||||| ||| ||| | |||||||||| || ||| ||||| ||| |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgct 100
Query: 70 aataaatctagacacatatttg--tatagatttactaacatctatatgaatatggacaat 127
||| ||| || ||| |||| || |||||||| | || ||||||||||||||| || |||
Sbjct: 99 aatgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaat 40
Query: 128 actaaaaagacttgcattataaaacggaggaagtat 163
|| || ||||| |||| | ||||||||| |||||
Sbjct: 39 gttagaatgacttacattgtgaaacggagggagtat 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 106 catctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagtat 163
||||||||||||| |||| ||| ||| || ||||| |||| | ||||||||| |||||
Sbjct: 102 catctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 106/132 (80%), Gaps = 2/132 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
||||||||||||| || |||| ||| | ||||| |||| |||||||| |||| ||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 71 ataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaata 128
|| |||||| ||| |||| | || || ||| | || |||| ||||||||||||| ||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 129 ctaaaaagactt 140
||| || |||||
Sbjct: 38 ctagaatgactt 27
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 106 catctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||| |||||||||||| ||||||| || ||||| |||||| ||||||||| ||||
Sbjct: 80 catcaatatgaatatgggaaatactagaatgacttacattatgaaacggagggagta 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | |||||| ||| | |||||| |||| ||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 71 ataaatctagac 82
|| |||||||||
Sbjct: 76 atgaatctagac 65
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || ||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 71 ataaatcta 79
|| ||||||
Sbjct: 65 atgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 92 tatagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaa 151
|||||||| | |||||||||||||||| ||| ||| ||| || ||||| |||| | |||
Sbjct: 75 tatagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 152 cggaggaagta 162
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
|||||||||| |||||||||| || | |||||||||||| || || ||||| |||||
Sbjct: 133 atactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtt 74
Query: 70 aataaatctagac 82
||| |||||||||
Sbjct: 73 aatgaatctagac 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 108 tctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||||| |||||| ||| ||| || ||||| |||||| ||||||||||||||
Sbjct: 59 tctatatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatata 63
|||||||||||||||| ||| |||| ||||||||||||| || ||| |||||
Sbjct: 120 tactccctccgtttcacaatgtaagagtttctagcattgcccacattcatata 68
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 121/153 (79%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| ||||||||||| |||| ||| | |||||||||| | || ||||||| |||||
Sbjct: 157 atacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtt 98
Query: 70 aataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatac 129
||| ||||| |||| || | | |||||| | ||||||| |||||||| ||| ||| |
Sbjct: 97 aatgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 130 taaaaagacttgcattataaaacggaggaagta 162
|| || ||||| |||| | ||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | |||||||||| | || ||| |||| |||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 71 ataaatctagaca 83
|| ||||||||||
Sbjct: 92 atgaatctagaca 80
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||||||||||||||| |||| ||| | ||||| |||| | || ||| |||| ||||
Sbjct: 137 tatactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgt 78
Query: 69 taataaatctaga 81
|||| ||||||||
Sbjct: 77 taatgaatctaga 65
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatat 62
||||||||||| |||||||||| ||| | |||||||||| |||||||||||
Sbjct: 140 atactccctccatttcataatataagtcattctagcattttccatatttatat 88
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 71 ataaatcta 79
|| ||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcatt 48
||||||||||||||||||| |||| ||| | ||||||||||
Sbjct: 2 atatactccctccgtttcacaatataagtcattctagcatt 42
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 8 atatactccctccgtttcataatacaagactttctagcatt 48
||||||||||||||||||| |||| ||| | ||||||||||
Sbjct: 2 atatactccctccgtttcacaatataagtcattctagcatt 42
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| ||||||||| ||| |||| |||| ||| || || ||||| ||||||||||||
Sbjct: 70 tagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaacg 129
Query: 154 gaggaagta 162
|||| ||||
Sbjct: 130 gagggagta 138
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| | |||||| ||||||||||||| ||| ||| || ||||| |||| | |||||
Sbjct: 66 tagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacg 125
Query: 154 gaggaagta 162
|||||||||
Sbjct: 126 gaggaagta 134
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 35 gactttctagcattgctcatatttatatatatgttaataaatctagacacat 86
||||||||| |||||| || ||| |||| |||||||| |||||||||||||
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatctagacacat 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 35 gactttctagcattgctcatatttatatatatgttaataaatctaga 81
|||||||||||||||| || ||| |||| |||||||| ||||||||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatctaga 47
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||| |||||||| ||| ||| ||| || ||||| |||||| ||||||||||||||
Sbjct: 70 taacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||||||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 71 ataaatctagacacatat 88
|| ||||||||| ||||
Sbjct: 69 atggatctagacatatat 52
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa Indica
Group
Length = 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||||| |||||| |||| | | || |||| ||| |||||||||||||||||||||
Sbjct: 64 taacatctagatgaatgtggaaagtgttagaaagtcttacattataaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatg 67
||||||||||||||||||| ||| ||| | |||||||||| ||||||||||| ||
Sbjct: 149 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgata 90
Query: 68 ttaataaatcta 79
||||| ||||||
Sbjct: 89 ttaatgaatcta 78
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||| ||||||||||| ||| ||| | |||||||||| |||| ||| |||||| |||
Sbjct: 159 atacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtt 100
Query: 70 aataaatctaga 81
||| ||||||||
Sbjct: 99 aatgaatctaga 88
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 7 catatactccctccgtttcataatacaagactttctagcattgctcatatttatatatat 66
|||||||||||||||||||| ||| ||| | | ||||||| |||||||| ||||||||
Sbjct: 1 catatactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatatatat 60
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 112 tatgaatatggacaatactaaaaagacttgcattataaaacggaggaagtat 163
||||||| |||| ||||||| || ||||| |||| | |||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 111 atatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
|||||||| ||| |||||||||| ||||| |||| | ||||||||||||||
Sbjct: 58 atatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 87 atttgtatagatttactaacatctatatgaatatggacaatactaaaaagacttgcatta 146
|||||| |||||||| |||||| |||||||| ||| ||| ||| || ||||| ||||
Sbjct: 69 atttgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattg 128
Query: 147 taaaacggaggaagta 162
| ||||||||||||||
Sbjct: 129 tgaaacggaggaagta 144
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 90/111 (81%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||||||||||||||| ||| ||| | |||||||||| | || ||| ||||| |||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 100
Query: 70 aataaatctagacacatat--ttgtatagatttactaacatctatatgaat 118
|| |||||| | | |||| ||| |||||| | ||||||||||||||||
Sbjct: 99 gatgaatctaaatatatatagatgtctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||| |||||||| ||| ||| |||||| ||||| |||| | ||||||||||||||
Sbjct: 75 taacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 134
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||||| |||||||| ||| ||| ||| || |||||||||| | ||||||||||||||
Sbjct: 64 taacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 9 tatactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgt 68
|||||| ||||||||||| ||| ||| | |||||||||| | || ||| |||| ||| |
Sbjct: 137 tatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatat 78
Query: 69 taataaatctagacacatat 88
|||| |||||||||| ||||
Sbjct: 77 taatgaatctagacatatat 58
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| ||| | |||||||||| | || ||| |||| || |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||||||| ||| | |||||||||| | | ||| |||| ||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 63 atgaatctaga 53
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
||||||||||||||||| ||| ||||| |||||| ||| | || ||| |||| || ||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatt 100
Query: 70 aataaatctagacacatat 88
||| |||||||||| ||||
Sbjct: 99 aatgaatctagacatatat 81
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| ||| | |||||||||| | || ||| |||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 72 atgaatctaga 62
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattg 49
|||||||||||||||| ||| ||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcattg 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 103 taacatctatatgaatatggacaatactaaaaagacttgcattataaaacggagg 157
||||||||| || ||| |||||||||||| |||| ||| |||| | |||||||||
Sbjct: 59 taacatctaaataaatgtggacaatactagaaagccttacattgtgaaacggagg 113
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 14 tccctccgtttcataatacaagactttctagcattgctcatatttatatatatgttaata 73
||||||||||||| ||| ||| | |||||||||| |||| ||| |||| |||| |||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 74 aatctagacacatat 88
|||||||||| ||||
Sbjct: 95 aatctagacatatat 81
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 89 atgaatctaga 79
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | ||||| |||| | || ||| |||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 71 ataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| | || |||||| | ||| ||| |||||||| || | ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
||| || ||||| |||| | ||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| ||| | |||||||||| | || ||| |||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || |||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 71 ataaatctaga 81
|||||| ||||
Sbjct: 65 ataaatttaga 75
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattg 49
||||| |||||||||| ||| |||||||||||||||||
Sbjct: 94 tactctctccgtttcacaatgtaagactttctagcattg 56
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 120/152 (78%), Gaps = 4/152 (2%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| |||| ||| | |||||||||| | | ||| |||| ||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 71 ataaatctagacacatatttgtatagatttactaacatctatatgaatatggacaatact 130
|| |||||||||| ||| | |||||| | || |||| |||||||| ||| ||| ||
Sbjct: 92 atgaatctagacatata----tctagattcattagcatcaatatgaatgtgggaaatgct 37
Query: 131 aaaaagacttgcattataaaacggaggaagta 162
| || ||||| |||| | ||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 14 tccctccgtttcataatacaagactttctagcattgctcatat 56
||||||||||||| |||| ||| | |||||||||| |||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatat 50
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || ||| ||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 71 ataaatctagacacatatttgta--tagatttactaacatctatatgaatatggacaata 128
|| |||||||||| |||| | || |||||| | ||| ||| |||||||| |||| |||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 129 ctaaaaagacttgcattataaaacggaggaagta 162
|| || ||||| |||| | ||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| |||| ||| |||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 71 ataaatctaga 81
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 105 acatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagtat 163
||||| |||||||||||| ||| ||| || ||||| |||| | |||||||||||||||
Sbjct: 85 acatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtat 143
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||| |||| ||| | ||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatt 103
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 7 catatactccctccgtttcataatacaagactttctagcatt 48
|||||||| |||| ||||||||||| ||| | ||||||||||
Sbjct: 1 catatacttcctctgtttcataatataagtcattctagcatt 42
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||||||| ||| | ||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatt 91
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||||||| ||| | ||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatt 98
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||||||| ||| | ||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatt 101
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 7 catatactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||||||| ||| ||| | ||||||||||
Sbjct: 1 catatactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||| | |||||||||| | || ||| |||| ||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 ataaatctagacacatat 88
|| |||||||||| ||||
Sbjct: 65 atgaatctagacatatat 82
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||| |||| ||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatt 42
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 105 acatctatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagta 162
||||| |||||||| |||| ||| ||| || ||||| |||| | ||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 94 tagatttactaacatctatatgaatatggacaatactaaaaagacttgcattataaaacg 153
|||||| | ||| ||| |||||||| ||| ||| ||| || ||||| |||||| |||||
Sbjct: 47 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 106
Query: 154 gaggaagtat 163
||||||||||
Sbjct: 107 gaggaagtat 116
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 110 tatatgaatatggacaatactaaaaagacttgcattataaaacggaggaagtat 163
|||||||||||||| ||| ||| || ||||| |||| | ||||||||| |||||
Sbjct: 78 tatatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtat 131
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaaga 36
||||||||||||||||||||| ||||
Sbjct: 137 tactccctccgtttcataatataaga 112
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||||||||||||||| ||| ||| | |||||||||| | || ||| ||| ||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 71 ataaatctagacacatat 88
|| |||||||||| ||||
Sbjct: 102 atgaatctagacatatat 85
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 8 atatactccctccgtttcataatacaagactttctagcattgctcatatttata 61
||||||||||||||||||| ||| ||| | |||||||||| | || |||||||
Sbjct: 124 atatactccctccgtttcacaatctaagtcattctagcatttcccacatttata 71
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtta 70
|||| ||||||||||| ||| ||| | |||||||||| |||| |||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 71 at 72
||
Sbjct: 65 at 66
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 10 atactccctccgtttcataatacaagactttctagcattgctcatatttatatatatgtt 69
|||||||||||||| || ||| ||| | || ||||||| | ||||||||||| ||| |
Sbjct: 4 atactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgct 63
Query: 70 aataaatctagaca 83
||| ||||||||||
Sbjct: 64 aatgaatctagaca 77
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa
Indica Group
Length = 143
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||||||| ||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatacaagactttctagcatt 48
|||||||||||||||| |||| ||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatt 42
