miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AACY021059370.1/94-20 408172:marine metagenome
Length = 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatca 81
||||||||||||||||||||||||
Sbjct: 30 tcatcgtcatcgtcatcatcatca 7
>RF01059;mir-598;AASC02030034.1/207-302 6500:Aplysia californica
(California sea hare)
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatca 81
||||||||||||||||||||||||
Sbjct: 30 tcatcgtcatcgtcatcatcatca 7
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatca 81
||||||||||||||||||||||||
Sbjct: 51 tcatcgtcatcgtcatcatcatca 28
>RF01059;mir-598;AASC02014353.1/13263-13358 6500:Aplysia
californica (California sea hare)
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatca 81
||||||||||||||||||||||||
Sbjct: 66 tcatcgtcatcgtcatcatcatca 43
>RF01059;mir-598;AASC02010496.1/2194-2290 6500:Aplysia californica
(California sea hare)
Length = 97
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatca 81
||||||||||||||||||||||||
Sbjct: 42 tcatcgtcatcgtcatcatcatca 19
>RF01059;mir-598;AASC02042577.1/5304-5401 6500:Aplysia californica
(California sea hare)
Length = 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatca 81
||||||||||||||||||||||||
Sbjct: 42 tcatcgtcatcgtcatcatcatca 19
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatcacca 84
||||||||||| |||||||||||||||
Sbjct: 36 tcatcgtcatcatcatcatcatcacca 10
>RF01059;mir-598;AAHY01469015.1/759-665 10090:Mus musculus (house
mouse)
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tcatcgtcatcgtcatcatcatca 81
||||||||||||||||||||||||
Sbjct: 57 tcatcgtcatcgtcatcatcatca 80
>RF01059;mir-598;AAPO01000014.1/120430-120523 379508:Lodderomyces
elongisporus NRRL YB-4239
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatca 81
||||||||||||||||||||||||
Sbjct: 24 tcatcgtcatcgtcatcatcatca 1
>RF01059;mir-598;AACY020757299.1/526-403 408172:marine metagenome
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tcatcgtcatcgtcatcatcatc 80
|||||||||||||||||||||||
Sbjct: 101 tcatcgtcatcgtcatcatcatc 123
>RF01059;mir-598;AASC02056842.1/2079-1955 6500:Aplysia californica
(California sea hare)
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatcacca 84
||||||||||| |||||||||||||||
Sbjct: 36 tcatcgtcatcatcatcatcatcacca 10
>RF01059;mir-598;AANI01016597.1/18315-18448 7244:Drosophila
virilis
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 59 catcgtcatcgtcatcatcatca 81
|||||||||||||||||||||||
Sbjct: 47 catcgtcatcgtcatcatcatca 25
>RF01059;mir-598;AACY021046878.1/87-1 408172:marine metagenome
Length = 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 55 ttttcatcgtcatcgtcatcatcatcaccaccat 88
|||||||| ||||| |||||||||||| ||||||
Sbjct: 45 ttttcatcatcatcatcatcatcatcatcaccat 12
>RF01059;mir-598;AASC02003775.1/749-654 6500:Aplysia californica
(California sea hare)
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 58 tcatcgtcatcgtcatcatcatcaccacca 87
||||| ||||| ||||||||||||||||||
Sbjct: 54 tcatcatcatcatcatcatcatcaccacca 25
>RF01059;mir-598;AAGJ02145196.1/6269-6174 7668:Strongylocentrotus
purpuratus
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 66 atcgtcatcatcatcaccacca 87
||||||||||||||||||||||
Sbjct: 58 atcgtcatcatcatcaccacca 37
>RF01059;mir-598;AAGJ02120870.1/10450-10545
7668:Strongylocentrotus purpuratus
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 catcgtcatcgtcatcatcatcacca 84
||||||||| ||||||||||||||||
Sbjct: 38 catcgtcattgtcatcatcatcacca 13
>RF01059;mir-598;AADB02029524.1/511-419 9606:Homo sapiens (human)
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 63 gtcatcgtcatcatcatcaccaccat 88
|||||||||| |||||||||||||||
Sbjct: 37 gtcatcgtcaccatcatcaccaccat 12
>RF01059;mir-598;AAWZ01000888.1/17004-17090 28377:Anolis
carolinensis (green anole)
Length = 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tcatcgtcatcgtcatcatcat 79
||||||||||||||||||||||
Sbjct: 58 tcatcgtcatcgtcatcatcat 79
>RF01059;mir-598;AAWZ01000992.1/119012-118927 28377:Anolis
carolinensis (green anole)
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 gtcatcgtcatcatcatcaccaccat 88
|||||| |||||||||||||||||||
Sbjct: 56 gtcatcctcatcatcatcaccaccat 81
>RF01059;mir-598;ABJB010481179.1/3277-3189 6945:Ixodes scapularis
(black-legged tick)
Length = 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 57 ttcatcgtcatcgtcatcatca 78
||||||||||||||||||||||
Sbjct: 52 ttcatcgtcatcgtcatcatca 31
>RF01059;mir-598;AC171131.2/41715-41578 6412:Helobdella robusta
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 atcgtcatcgtcatcatcatca 81
||||||||||||||||||||||
Sbjct: 117 atcgtcatcgtcatcatcatca 138
