miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
           subsp. aegilopoides
          Length = 117

 Score = 46.1 bits (23), Expect = 4e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 9   agtactccctccgtcccaaatta 31
           |||||||||||||||||||||||
Sbjct: 115 agtactccctccgtcccaaatta 93




>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
          Length = 94

 Score = 46.1 bits (23), Expect = 4e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 9  agtactccctccgtcccaaatta 31
          |||||||||||||||||||||||
Sbjct: 92 agtactccctccgtcccaaatta 70




>RF00906;MIR1122;EU379326.1/1838-1972 269377:Poa palustris
          Length = 135

 Score = 46.1 bits (23), Expect = 4e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 11  tactccctccgtcccaaattagatgag 37
           |||||||||||| ||||||||||||||
Sbjct: 131 tactccctccgttccaaattagatgag 105