miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00464;mir-92;ABEP02031049.1/2682-2605 7739:Branchiostoma
floridae (Florida lancelet)
Length = 78
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 13 cctgtcagacaggtcaggattggtggcaatgcttataaacgtgtcagtattgcacttgtc 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgtcagacaggtcaggattggtggcaatgcttataaacgtgtcagtattgcacttgtc 60
Query: 73 ccggcctttctgattggt 90
||||||||||||||||||
Sbjct: 61 ccggcctttctgattggt 78
>RF00464;mir-92;AAWZ01041388.1/1227-1308 28377:Anolis carolinensis
(green anole)
Length = 82
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 cagtattgcacttgtcccggcct 79
|||||||||||||||||||||||
Sbjct: 49 cagtattgcacttgtcccggcct 71
>RF00464;mir-92;ABQO010442129.1/1114-1031 9315:Macropus eugenii
(tammar wallaby)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 52 agtattgcacttgtcccggcct 73
>RF00464;mir-92;AAFR03056382.1/2360-2443 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 52 agtattgcacttgtcccggcct 73
>RF00464;mir-92;FP015951.3/28649-28570 9823:Sus scrofa (pig)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 48 agtattgcacttgtcccggcct 69
>RF00464;mir-92;ABDC01275774.1/2124-2045 30608:Microcebus murinus
(gray mouse lemur)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 48 agtattgcacttgtcccggcct 69
>RF00464;mir-92;AACZ02222074.1/3149-3227 9598:Pan troglodytes
(chimpanzee)
Length = 79
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 47 agtattgcacttgtcccggcct 68
>RF00464;mir-92;AAHY01210291.1/5443-5364 10090:Mus musculus (house
mouse)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 48 agtattgcacttgtcccggcct 69
>RF00464;mir-92;AAGW01169230.1/2308-2388 9986:Oryctolagus
cuniculus (rabbit)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 49 agtattgcacttgtcccggcct 70
>RF00464;mir-92;AAIY01238597.1/3124-3045 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 48 agtattgcacttgtcccggcct 69
>RF00464;mir-92;ABRQ01318667.1/1002-921 9813:Procavia capensis
(cape rock hyrax)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 50 agtattgcacttgtcccggcct 71
>RF00464;mir-92;ABQF01018395.1/1757-1837 59729:Taeniopygia guttata
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 49 agtattgcacttgtcccggcct 70
>RF00464;mir-92;CAAK05051440.1/15632-15557 7955:Danio rerio
(zebrafish)
Length = 76
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 agtattgcacttgtcccggcct 79
||||||||||||||||||||||
Sbjct: 44 agtattgcacttgtcccggcct 65
>RF00464;mir-92;ABEP02031048.1/3570-3494 7739:Branchiostoma
floridae (Florida lancelet)
Length = 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 tattgcacttgtcccggccttt 81
||||||||||||||||||||||
Sbjct: 47 tattgcacttgtcccggccttt 68