miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00464;mir-92;ABEP02031048.1/3570-3494 7739:Branchiostoma
floridae (Florida lancelet)
Length = 77
Score = 143 bits (72), Expect = 4e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 11 cctgacaagaaggtcgtgataggtggcaatgttgtacccacacaaatattgcacttgtcc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgacaagaaggtcgtgataggtggcaatgttgtacccacacaaatattgcacttgtcc 60
Query: 71 cggcctttttgc 82
||||||||||||
Sbjct: 61 cggcctttttgc 72
>RF00464;mir-92;AAGJ02142502.1/22630-22713 7668:Strongylocentrotus
purpuratus
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 aatattgcacttgtcccggcct 76
||||||||||||||||||||||
Sbjct: 52 aatattgcacttgtcccggcct 73
>RF00464;mir-92;AAGJ02142502.1/20488-20574 7668:Strongylocentrotus
purpuratus
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 aatattgcacttgtcccggcct 76
||||||||||||||||||||||
Sbjct: 55 aatattgcacttgtcccggcct 76
>RF00464;mir-92;AAVX01075480.1/600-523 7868:Callorhinchus milii
(ghost shark)
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 aatattgcacttgtcccggcct 76
||||||||||||||||||||||
Sbjct: 46 aatattgcacttgtcccggcct 67
>RF00464;mir-92;ABEP02031049.1/2682-2605 7739:Branchiostoma
floridae (Florida lancelet)
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 tattgcacttgtcccggccttt 78
||||||||||||||||||||||
Sbjct: 48 tattgcacttgtcccggccttt 69
>RF00464;mir-92;AAZO01005488.1/5199-5120 121224:Pediculus humanus
corporis (human body louse)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 aatattgcacttgtcccggcct 76
||||||||||||||||||||||
Sbjct: 48 aatattgcacttgtcccggcct 69
>RF00464;mir-92;AAZX01003786.1/19988-19908 7425:Nasonia
vitripennis (jewel wasp)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 aatattgcacttgtcccggcct 76
||||||||||||||||||||||
Sbjct: 52 aatattgcacttgtcccggcct 73
>RF00464;mir-92;AADG05005316.1/2307-2226 7460:Apis mellifera
(honey bee)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 aatattgcacttgtcccggcct 76
||||||||||||||||||||||
Sbjct: 53 aatattgcacttgtcccggcct 74
>RF00464;mir-92;AAWU01030066.1/31253-31174 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 aatattgcacttgtcccggcct 76
||||||||||||||||||||||
Sbjct: 48 aatattgcacttgtcccggcct 69
>RF00464;mir-92;AAGE02006821.1/67754-67834 7159:Aedes aegypti
(yellow fever mosquito)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 aatattgcacttgtcccggcct 76
||||||||||||||||||||||
Sbjct: 49 aatattgcacttgtcccggcct 70
>RF00464;mir-92;AAAB01007923.1/22644-22568 180454:Anopheles
gambiae str. PEST
Length = 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 aatattgcacttgtcccggcct 76
||||||||||||||||||||||
Sbjct: 45 aatattgcacttgtcccggcct 66
