miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00443;SNORA27;ABEP02003192.1/46934-47070 7739:Branchiostoma
floridae (Florida lancelet)
Length = 137
Score = 97.6 bits (49), Expect = 2e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 12 gaactccctcagaacaggccagctgaacacttatatttcttcctggtcgtattgagggag 71
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 1 gaactccctcagaacaggccagctgaattatcatatttcttcctggtcgtattgagggag 60
Query: 72 agaaa 76
|||||
Sbjct: 61 agaaa 65
>RF00443;SNORA27;ABEP02003192.1/52443-52579 7739:Branchiostoma
floridae (Florida lancelet)
Length = 137
Score = 95.6 bits (48), Expect = 8e-20
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 13 aactccctcagaacaggccagctgaacacttatatttcttcctggtcgtattgagggaga 72
|||||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 2 aactccctcacaacgggccagctgaacacttttatgtcttcctggtcgtattgagggaga 61
Query: 73 gaaa 76
||||
Sbjct: 62 gaaa 65
>RF00443;SNORA27;ABEP02003192.1/50570-50707 7739:Branchiostoma
floridae (Florida lancelet)
Length = 138
Score = 73.8 bits (37), Expect = 3e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 16 tccctcagaacaggccagctgaacacttatatttcttcctggtcgtattgagggagagaa 75
||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 5 tccctcataacgggccagctgaatgattacatttcttcctggtcgtattgagggagagaa 64
Query: 76 a 76
|
Sbjct: 65 a 65
