miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AACY020727500.1/262-353 408172:marine metagenome
Length = 92
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtca 80
|||||||||||||||||||||||
Sbjct: 76 catcatcatcatcatcgtcgtca 54
>RF01059;mir-598;ABRR01251863.1/4422-4510 30538:Lama pacos
(alpaca)
Length = 89
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtca 80
|||||||||||||||||||||||
Sbjct: 44 catcatcatcatcatcgtcgtca 22
>RF01059;mir-598;AABR04154735.1/655-538 10116:Rattus norvegicus
(Norway rat)
Length = 118
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 catcatcatcatcatcgtcgtca 80
|||||||||||||||||||||||
Sbjct: 96 catcatcatcatcatcgtcgtca 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 54 catcatcatcatcatcgtcgtc 75
>RF01059;mir-598;AAHX01322615.1/321-203 10116:Rattus norvegicus
(Norway rat)
Length = 119
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtca 80
|||||||||||||||||||||||
Sbjct: 29 catcatcatcatcatcgtcgtca 7
>RF01059;mir-598;AAZO01001814.1/10167-10045 121224:Pediculus
humanus corporis (human body louse)
Length = 123
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 57 ccatcatcatcatcatcgtcgtc 79
|||||||||||||||||||||||
Sbjct: 30 ccatcatcatcatcatcgtcgtc 8
>RF01059;mir-598;AAZO01004876.1/1291-1175 121224:Pediculus humanus
corporis (human body louse)
Length = 117
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 57 ccatcatcatcatcatcgtcgtc 79
|||||||||||||||||||||||
Sbjct: 27 ccatcatcatcatcatcgtcgtc 5
>RF01059;mir-598;AAFI02000020.1/228684-228588 352472:Dictyostelium
discoideum AX4
Length = 97
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtca 80
|||||||||||||||||||||||
Sbjct: 32 catcatcatcatcatcgtcgtca 10
>RF01059;mir-598;ACCP01000230.1/53511-53414 564608:Micromonas
pusilla CCMP1545
Length = 98
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 51 catcatcatcatcatcgtcgtc 72
>RF01059;mir-598;AASC02002498.1/2327-2422 6500:Aplysia californica
(California sea hare)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 55 caccatcatcatcatcatcgtc 76
||||||||||||||||||||||
Sbjct: 26 caccatcatcatcatcatcgtc 5
>RF01059;mir-598;AASC02037699.1/899-831 6500:Aplysia californica
(California sea hare)
Length = 69
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtcacca 83
|||||||||||||||| |||||||||
Sbjct: 35 catcatcatcatcatcatcgtcacca 10
>RF01059;mir-598;AASC02058861.1/4716-4811 6500:Aplysia californica
(California sea hare)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 29 catcatcatcatcatcgtcgtc 8
>RF01059;mir-598;AASC02055264.1/9706-9801 6500:Aplysia californica
(California sea hare)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 59 atcatcatcatcatcgtcgtca 80
||||||||||||||||||||||
Sbjct: 61 atcatcatcatcatcgtcgtca 40
>RF01059;mir-598;AAGJ02029244.1/3241-3325 7668:Strongylocentrotus
purpuratus
Length = 85
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtcacca 83
||||||||||||||||||| ||||||
Sbjct: 29 catcatcatcatcatcgtcatcacca 4
>RF01059;mir-598;AAGJ02004929.1/2335-2249 7668:Strongylocentrotus
purpuratus
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtcacca 83
|||||||||||||||| |||||||||
Sbjct: 26 catcatcatcatcatcttcgtcacca 1
>RF01059;mir-598;AAGJ02158258.1/814-898 7668:Strongylocentrotus
purpuratus
Length = 85
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtcacca 83
||||||||||||||||||| ||||||
Sbjct: 29 catcatcatcatcatcgtcatcacca 4
>RF01059;mir-598;AAGJ02108092.1/1014-1098 7668:Strongylocentrotus
purpuratus
Length = 85
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 57 catcatcatcatcatcgtcgtc 78
>RF01059;mir-598;AAGJ02002026.1/222-133 7668:Strongylocentrotus
purpuratus
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 55 caccatcatcatcatcatcgtc 76
||||||||||||||||||||||
Sbjct: 26 caccatcatcatcatcatcgtc 5
>RF01059;mir-598;AAGJ02130784.1/524-617 7668:Strongylocentrotus
purpuratus
Length = 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtcacca 83
||||||||||||||||||| ||||||
Sbjct: 47 catcatcatcatcatcgtcatcacca 22
>RF01059;mir-598;AAGJ02026630.1/5974-5881 7668:Strongylocentrotus
purpuratus
Length = 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 55 caccatcatcatcatcatcgtc 76
||||||||||||||||||||||
Sbjct: 41 caccatcatcatcatcatcgtc 20
>RF01059;mir-598;AAGJ02002862.1/1713-1617 7668:Strongylocentrotus
purpuratus
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtcacca 83
||||||||||||||||||| ||||||
Sbjct: 29 catcatcatcatcatcgtcatcacca 4
>RF01059;mir-598;ABBA01075593.1/42941-42879 9606:Homo sapiens
(human)
Length = 63
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 32 catcatcatcatcatcgtcgtc 11
>RF01059;mir-598;AABR04022381.1/4360-4446 10116:Rattus norvegicus
(Norway rat)
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 59 atcatcatcatcatcgtcgtca 80
||||||||||||||||||||||
Sbjct: 43 atcatcatcatcatcgtcgtca 22
>RF01059;mir-598;AAWZ01029771.1/63072-63013 28377:Anolis
carolinensis (green anole)
Length = 60
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 29 catcatcatcatcatcgtcgtc 8
>RF01059;mir-598;AAZO01006423.1/51661-51747 121224:Pediculus
humanus corporis (human body louse)
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 59 atcatcatcatcatcgtcgtca 80
||||||||||||||||||||||
Sbjct: 46 atcatcatcatcatcgtcgtca 25
>RF01059;mir-598;AAZO01003332.1/20363-20473 121224:Pediculus
humanus corporis (human body louse)
Length = 111
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 35 catcatcatcatcatcgtcgtc 14
>RF01059;mir-598;AAZO01001770.1/7300-7199 121224:Pediculus humanus
corporis (human body louse)
Length = 102
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 29 catcatcatcatcatcgtcgtc 8
>RF01059;mir-598;AAZO01002250.1/1532-1659 121224:Pediculus humanus
corporis (human body louse)
Length = 128
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 26 catcatcatcatcatcgtcgtc 5
>RF01059;mir-598;AAQB01006160.1/2820-2729 7260:Drosophila
willistoni
Length = 92
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtc 79
||||||||||||||||||||||
Sbjct: 29 catcatcatcatcatcgtcgtc 8
>RF01059;mir-598;AANI01016309.1/78148-78273 7244:Drosophila
virilis
Length = 126
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 54 ccaccatcatcatcatcatcgtcgtcaccaccaa 87
|||||||||||||||||||| || ||| ||||||
Sbjct: 42 ccaccatcatcatcatcatcatcatcatcaccaa 9
>RF01059;mir-598;ABJB010280147.1/6760-6855 6945:Ixodes scapularis
(black-legged tick)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtcacca 83
||||||||||||| ||||||||||||
Sbjct: 41 catcatcatcatcgtcgtcgtcacca 16
>RF01059;mir-598;AAGF03000556.2/15150-15203 312017:Tetrahymena
thermophila SB210
Length = 54
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 catcatcatcatcatcgtcgtcacca 83
||||||||||||||||||| ||||||
Sbjct: 29 catcatcatcatcatcgtcatcacca 4
