miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 198 bits (100), Expect = 2e-50
Identities = 121/128 (94%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 74
|||||||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||
Sbjct: 4 gtactccctccgtccgaaaatacttgtcatcaaaatggacaaaaagggatgtatttagaa 63
Query: 75 ctaatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgg 134
|||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 64 ctaaaatacatctagatacatccccttttattcattttgatgacaagtatttccggacgg 123
Query: 135 agggagta 142
||||||||
Sbjct: 124 agggagta 131
Score = 121 bits (61), Expect = 3e-27
Identities = 112/129 (86%)
Strand = Plus / Minus
Query: 14 tgtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctaga 73
||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 133 tgtactccctccgtccggaaatacttgtcatcaaaatgaataaaaggggatgtatctaga 74
Query: 74 actaatatacatctagatacatccccttttatttattttgatgacaagtatttccggccg 133
|| | || |||| ||||||||| |||| | ||||||||||||||||||| ||| ||
Sbjct: 73 tgtattttagttctaaatacatccctttttgtccattttgatgacaagtattttcggacg 14
Query: 134 gagggagta 142
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 182 bits (92), Expect = 9e-46
Identities = 119/128 (92%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| ||||| ||||||||| ||||||||||||| | ||||||||||||
Sbjct: 5 tactccctccgtccggaaatatttgtcatcagaatggataaaaagtggtgtatctagaac 64
Query: 76 taatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgga 135
||| ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct: 65 taaaatacatctagatacatccccttttattcatcttgatgacaagtatttccggacgga 124
Query: 136 gggagtat 143
||||||||
Sbjct: 125 gggagtat 132
Score = 103 bits (52), Expect = 7e-22
Identities = 109/128 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| |||||||||||||||| ||| |||||| | ||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaagatgaataaaaggggatgtatctagatg 72
Query: 76 taatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgga 135
|| | || |||||||||| | | |||||| ||| ||||||||| ||||||||| ||||
Sbjct: 71 tattttagttctagatacaccactttttatccattctgatgacaaatatttccggacgga 12
Query: 136 gggagtat 143
||||||||
Sbjct: 11 gggagtat 4
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 180 bits (91), Expect = 4e-45
Identities = 115/123 (93%)
Strand = Plus / Minus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 74
|||||||||||||||| |||||||||||||||||||| | |||||||||| |||||||||
Sbjct: 131 gtactccctccgtccgaaaatacttgtcatcaaaatgaacaaaaagagatatatctagaa 72
Query: 75 ctaatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgg 134
|||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 71 ctaaaatacatctaaatacatcccgttttatttattttgatgacaagtatttccggacgg 12
Query: 135 agg 137
|||
Sbjct: 11 agg 9
Score = 91.7 bits (46), Expect = 3e-18
Identities = 103/122 (84%)
Strand = Plus / Plus
Query: 21 cctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaactaata 80
|||||||||| ||||||||||||||||||| |||||| | ||||||| |||| || |
Sbjct: 9 cctccgtccggaaatacttgtcatcaaaataaataaaacgggatgtatttagatgtattt 68
Query: 81 tacatctagatacatccccttttatttattttgatgacaagtatttccggccggagggag 140
|| |||||||| ||| | |||| || ||||||||||||||||||| ||| |||||||||
Sbjct: 69 tagttctagatatatctctttttgttcattttgatgacaagtattttcggacggagggag 128
Query: 141 ta 142
||
Sbjct: 129 ta 130
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 178 bits (90), Expect = 1e-44
Identities = 120/130 (92%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtgactaaaaagagatgtatctagaac 72
Query: 76 taatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgga 135
||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 71 taaaatatgtctagatacatccccttttatccattttgatgacaagtatttccggacgga 12
Query: 136 gggagtatgt 145
||||||||||
Sbjct: 11 gggagtatgt 2
Score = 133 bits (67), Expect = 8e-31
Identities = 115/131 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcatcaaaatggataaaaggggatgtatctagaca 64
Query: 76 taatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgga 135
|| | || |||||||||||| | ||||| | | ||||||||||||||||| ||| ||||
Sbjct: 65 tattttagttctagatacatctctttttagtcactttgatgacaagtattttcggacgga 124
Query: 136 gggagtatgtt 146
|||||||||||
Sbjct: 125 gggagtatgtt 135
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 172 bits (87), Expect = 9e-43
Identities = 117/127 (92%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
|||||||||||||| ||||| |||||||||||||||||||||| ||| |||||| |||
Sbjct: 131 tactccctccgtccaaaaataattgtcatcaaaatggataaaaaaggatatatctaaaac 72
Query: 76 taatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgga 135
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 71 taatatacatctagatacatctccttttatttattttgatgacaagtatttccggacgga 12
Query: 136 gggagta 142
|| ||||
Sbjct: 11 ggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 106/128 (82%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
|||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 5 tacttcctccgtccggaaatacttgtcatcaaaataaataaaaggagatgtatctagatg 64
Query: 76 taatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgga 135
|| || | |||||| |||| |||||| ||||||||||||| ||||| || ||||
Sbjct: 65 tatattagttttagatatatccttttttatccattttgatgacaattatttttggacgga 124
Query: 136 gggagtat 143
||||||||
Sbjct: 125 gggagtat 132
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 168 bits (85), Expect = 1e-41
Identities = 119/129 (92%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 74
||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 4 gtactccctccgttcgaaaatacttgtcatcaaaatggataataagaaatgtatctagaa 63
Query: 75 ctaatatacatctagatacat-ccccttttatttattttgatgacaagtatttccggccg 133
|||| |||||||||||||||| |||||||||| |||||| |||||||||||||||| ||
Sbjct: 64 ctaaaatacatctagatacatcccccttttatccattttggtgacaagtatttccggacg 123
Query: 134 gagggagta 142
|||||||||
Sbjct: 124 gagggagta 132
Score = 87.7 bits (44), Expect = 4e-17
Identities = 108/128 (84%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaa-agagatgtatctagaa 74
||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 132 tactccctccgtccggaaatacttgtcaccaaaatggataaaagggggatgtatctagat 73
Query: 75 ctaatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgg 134
|| | || ||||||||||| | | |||| ||||||||||||||||||| || |||
Sbjct: 72 gtattttagttctagatacatttcttattatccattttgatgacaagtattttcgaacgg 13
Query: 135 agggagta 142
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 157 bits (79), Expect = 5e-38
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 25 cgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaactaatataca 84
|||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaagagatgtacctagaactaaaatata 73
Query: 85 tctagatacatccccttttatttattttgatgacaagtatttccggccggagggagtat 143
||||||||||| | ||||||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 74 tctagatacattcttttttatttactttgatgacaagtattttcggacggagggagtat 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| ||||||||||||||||| | ||||||| |||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtaaataaaaaagaatgtatctagata 72
Query: 76 taatatacatctagatacatccccttttatttattttgatgacaagtattt 126
|| | || ||||| |||||| | |||||| |||||||||||||||||||
Sbjct: 71 tattttagttctaggtacatctctttttatccattttgatgacaagtattt 21
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 147 bits (74), Expect = 5e-35
Identities = 98/106 (92%)
Strand = Plus / Plus
Query: 25 cgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaactaatataca 84
|||||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaaatgatgtacctagaactaaaataca 73
Query: 85 tctagatacatccccttttatttattttgatgacaagtatttccgg 130
|||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 74 tctatatacattcccttttattcattttgatgacaagtatttccgg 119
Score = 58.0 bits (29), Expect = 4e-08
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 14 tgtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctaga 73
|||||||||| | ||| |||||||||||||||||||| |||||| | |||||| ||||
Sbjct: 133 tgtactccctttgcccggaaatacttgtcatcaaaatgaataaaagggaatgtatataga 74
Query: 74 actaatatacatctagatacatccccttttatttattttgatgacaagtattt 126
|| | || ||||| |||||| |||||| |||||||||||||||||||
Sbjct: 73 tgtattttagttctaggtacatcattttttatccattttgatgacaagtattt 21
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 143 bits (72), Expect = 8e-34
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggataaaaataaatgtatttagaac 72
Query: 76 taatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgga 135
||| ||| | || |||||||| ||| |||||||||||||||||||||||| ||| || |
Sbjct: 71 taaaatatgtttaaatacatcctcttatatttattttgatgacaagtattttcggacgaa 12
Query: 136 gggagtat 143
||||||||
Sbjct: 11 gggagtat 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 108 attttgatgacaagtatttccggccggagggagtat 143
||||||||||||||||||| ||| ||||||||||||
Sbjct: 97 attttgatgacaagtattttcggacggagggagtat 132
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 135 bits (68), Expect = 2e-31
Identities = 113/128 (88%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 74
|||||| || |||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gtactcgcttcgtccgaaaatacttgtcatcaaaatggataaaaaagaatgtatctagaa 63
Query: 75 ctaatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgg 134
||| ||||||||||||||||| ||||||| |||||||||||||||||||| || |||
Sbjct: 64 ttaaaatacatctagatacatcttcttttatccattttgatgacaagtatttctggacgg 123
Query: 135 agggagta 142
|| |||||
Sbjct: 124 agagagta 131
Score = 93.7 bits (47), Expect = 7e-19
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 131 tactctctccgtccagaaatacttgtcatcaaaatggataaaagaagatgtatctagatg 72
Query: 76 taatatacatctagatacatccccttttatttattttgatgacaagtattt 126
|| | || ||||||||||| | |||||| |||||||||||||||||||
Sbjct: 71 tattttaattctagatacattcttttttatccattttgatgacaagtattt 21
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 129 bits (65), Expect = 1e-29
Identities = 89/97 (91%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| |||||||||||||||| ||| | |||||||||||||| ||||||
Sbjct: 142 tactccctccgtccgaaaatacttgtcatcaatatgaacaaaaagagatgtatgtagaac 83
Query: 76 taatatacatctagatacatccccttttatttatttt 112
||| |||||||||||||||||| |||||||||||||
Sbjct: 82 taaaatacatctagatacatccttttttatttatttt 46
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 85 tctagatacatccccttttatttattttgatgacaagtatttccggccggagggagtat 143
|||| ||||||| | |||| || || |||||||||||||||| ||| ||||||||||||
Sbjct: 85 tctacatacatctctttttgttcatattgatgacaagtattttcggacggagggagtat 143
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 111 bits (56), Expect = 3e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 74
|||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 122 gtactccctctgtccgaaaatacttgtcatcaaaatggataaaaatgaatgtatctagaa 63
Query: 75 ctaatatacatctagataca 94
|||| |||||||||||||||
Sbjct: 62 ctaaaatacatctagataca 43
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 85 tctagatacatccccttttatttattttgatgacaagtatttccggccggagggagta 142
||||||||||| | |||||| ||||||||||||||||||| ||| | |||||||||
Sbjct: 64 tctagatacattcatttttatccattttgatgacaagtattttcggacagagggagta 121
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
|||||||||||||| ||||||||||| | ||||| ||||||| ||||||||||||||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 62
Query: 76 taatatacatctagatacatcc 97
||| ||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatcc 40
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtc 42
|||||||||||||||| |||||||||||
Sbjct: 4 gtactccctccgtccggaaatacttgtc 31
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
|||||||||||||| ||||||||||| | ||||| ||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 64
Query: 76 taatatacatctagatacatcc 97
||| ||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatcc 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtc 42
||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtc 95
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| || ||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggataaaaatggatatatctagaac 62
Query: 76 taatatacatctagatacatcc 97
||| ||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatcc 40
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 115 tgacaagtatttccggccggagggagtatgt 145
||||||||| |||||| ||||||||||||||
Sbjct: 94 tgacaagtaattccggacggagggagtatgt 124
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| || |||||||| |||||||||| | ||| ||||||||||||||
Sbjct: 5 tactccctccgtccggaagtacttgtcgtcaaaatggaaagaaatggatgtatctagaac 64
Query: 76 taatatacatctagatacatcc 97
||| |||| |||||||||||||
Sbjct: 65 taaaatacgtctagatacatcc 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 108 attttgatgacaagtatttccggccggagggagtat 143
||||||| |||||||| |||||| ||||||||||||
Sbjct: 39 attttgacgacaagtacttccggacggagggagtat 4
>RF00906;MIR1122;AY951949.1/1544-1411 4568:Triticum monococcum
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 108/129 (83%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 74
|||||| ||||||||| ||||||||||||| |||||| | ||||| | || ||| || ||
Sbjct: 4 gtactctctccgtccgaaaatacttgtcattaaaatgaacaaaaaaa-atatatttaaaa 62
Query: 75 ctaatatacatctagatacatccccttttatttattttgatgacaagtatttccggccgg 134
|||| |||||| ||||||||| |||||||||||||||||||||||||| ||| |
Sbjct: 63 ctaaaatacatttagatacatttttatttatttattttgatgacaagtattttcggatag 122
Query: 135 agggagtat 143
|||||||||
Sbjct: 123 agggagtat 131
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatcta 71
||||||||| |||| ||||||||||||||||||| ||||| | | |||||||||
Sbjct: 130 tactccctctatccgaaaatacttgtcatcaaaataaataaataaaaatgtatcta 75
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggataaaa 58
|||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtccgaaaatacttgtcatcaaaatggataaaa 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaa 58
|||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 96 tacttcctccgtccgaaaatacttgtcatcaaaatggataaaa 54
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 99 cttttatttattttgatgacaagtatttccggccggagggagta 142
||||||| ||||||||||||||||||| ||| |||||||||||
Sbjct: 48 cttttatccattttgatgacaagtattttcggacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 96 ccccttttatttattttgatgacaagtatttccggccggagggagta 142
|||||||||| ||||||||||||||||||| ||| |||||| ||||
Sbjct: 50 ccccttttatccattttgatgacaagtattttcggacggaggaagta 96
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 75.8 bits (38), Expect = 2e-13
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 74
|||||||||||||||| ||||||||||||| |||||| |||||| | |||||||||| ||
Sbjct: 121 gtactccctccgtccggaaatacttgtcataaaaatgtataaaatg-gatgtatctataa 63
Query: 75 ctaatatacatctagatacatc 96
||| ||| ||||||||||||
Sbjct: 62 gtaaaataagtctagatacatc 41
Score = 60.0 bits (30), Expect = 9e-09
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 61 agatgtatctagaactaatatacatctagatacatccccttttatttattttgatgacaa 120
||||||||||||| || | ||| | ||||||||||| |||||| ||||| |||||||
Sbjct: 40 agatgtatctagacttattttacttatagatacatcca-ttttatacatttttatgacaa 98
Query: 121 gtatttccggccggagggagta 142
|||||||||| |||||||||||
Sbjct: 99 gtatttccggacggagggagta 120
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||
Sbjct: 121 tactccctccgtccggaactacttgttgcagaaatggataaaaatggatgtatctagaac 62
Query: 76 taatatacatctagatacatcc 97
||| |||| |||||||||||||
Sbjct: 61 taaaatacgtctagatacatcc 40
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 74
|||||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||
Sbjct: 4 gtactccctccgtccggaaatacttgtcgcagaaatggatataaatggatgtatctagaa 63
Query: 75 ctaatatacatct 87
|||| ||||||||
Sbjct: 64 ctaaaatacatct 76
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 15 gtactccctccgtccgcaaatacttgtc 42
|||||||||||||||| |||||||||||
Sbjct: 123 gtactccctccgtccgaaaatacttgtc 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 116 gacaagtatttccggccggagggagta 142
||||||||||||||| |||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| || ||||||||| ||||| ||||||| |||||||||||||
Sbjct: 5 tactccctccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaat 64
Query: 76 taatatacatctagatacat 95
|| ||||||||||||||||
Sbjct: 65 tataatacatctagatacat 84
Score = 54.0 bits (27), Expect = 6e-07
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 63 atgtatctagaactaatatacatctagatacatccccttttatttattttgatgacaagt 122
||||||||||| || |||| ||||||||||||| |||||| |||| ||||||||
Sbjct: 84 atgtatctagatgtattataattctagatacatccatttttatacatttatgtgacaagt 25
Query: 123 atttccggccggagggagtatgt 145
| |||||| ||||||||||||||
Sbjct: 24 aattccggacggagggagtatgt 2
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 17 actccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaact 76
||||||||||| || ||||||||||| ||||| |||||| | ||||||||||||||
Sbjct: 1 actccctccgttcggaaatacttgtcggagaaatgcctaaaaataaatgtatctagaact 60
Query: 77 aatatacatctagatacat 95
|| ||||||||||||||||
Sbjct: 61 aaaatacatctagatacat 79
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 47 aaatggataaaaagagatgtatctagaactaatatacatctagatacatcc 97
|||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 90 aaattgataaaaatggatgtatctagaactaaaatacatctagatacatcc 40
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
|||||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatggatgtatctagaac 64
Query: 76 taatatacatctagatacatcc 97
||| |||| ||||| |||||||
Sbjct: 65 taaaatacgtctaggtacatcc 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 13 ttgtactccctccgtccgcaaatacttgtca 43
|||||||||||| ||||| ||||||||||||
Sbjct: 124 ttgtactccctctgtccggaaatacttgtca 94
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 19 tccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaactaa 78
||||||||| || || |||| |||| |||||||||||||| |||||||||| || |||
Sbjct: 8 tccctccgttcgaaattactcgtcacaaaaatggataaaaatggatgtatctacaattaa 67
Query: 79 tatacatctagatacat 95
||||||||||||||||
Sbjct: 68 aatacatctagatacat 84
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||| ||||| || |||||||| ||||||||||||| |||||||||||||
Sbjct: 5 tactccctctgtccggaattacttgtcgcataaatggataaaaatggatgtatctagaat 64
Query: 76 taatatacatctagata 92
||| |||||||||||||
Sbjct: 65 taaaatacatctagata 81
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 116 gacaagtatttccggccggagggagtat 143
||||||||||||||| ||||||||||||
Sbjct: 95 gacaagtatttccggacggagggagtat 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtc 42
||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtc 95
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 62 gatgtatctagaactaatatacatctagatacatcc 97
||||||||||||||||| ||||||||||||||||||
Sbjct: 74 gatgtatctagaactaaaatacatctagatacatcc 39
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 63.9 bits (32), Expect = 6e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| ||||||||||| | |||||||||| | | |||||||||| |||
Sbjct: 5 tactccctccgtccggaaatacttgtcctaaaaatggatatattg-gatgtatctataac 63
Query: 76 taatatacatctagatacat 95
||| ||| |||||||||||
Sbjct: 64 taaaataagtctagatacat 83
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 116 gacaagtatttccggccggagggagtatg 144
||||||||||||||| |||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagtatg 3
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 14 tgtactccctccgtccgcaaatacttgtc 42
||||||||||||||||| |||||||||||
Sbjct: 122 tgtactccctccgtccggaaatacttgtc 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 116 gacaagtatttccggccggagggagta 142
||||||||||||||| |||||||||||
Sbjct: 94 gacaagtatttccggacggagggagta 120
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 62 gatgtatctagaactaatatacatctagatacatcc 97
||||||||||||||||| ||||||||||||||||||
Sbjct: 41 gatgtatctagaactaaaatacatctagatacatcc 76
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 46 aaaatggataaaaagagatgtatctagaactaatatacatctagatacatcc 97
|||||||||||||| ||||||||||||| ||| |||| |||||||||||||
Sbjct: 91 aaaatggataaaaatggatgtatctagaagtaaaatacgtctagatacatcc 40
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 62 gatgtatctagaactaatatacatctagatacat 95
||||||||||||||||| ||||||||||||||||
Sbjct: 41 gatgtatctagaactaaaatacatctagatacat 74
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 56 aaaagagatgtatctagaactaatatacatctagatacatcc 97
|||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 35 aaaatagatgtatctagaactaaaatacgtctagatacatcc 76
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
|||||||||| | || || |||||||| |||||| ||| ||| |||||||||| |||
Sbjct: 121 tactccctccatgcggaattacttgtcgcaaaaatgaatagaaatggatgtatctataac 62
Query: 76 taatatacatctagatacatcc 97
||| ||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatcc 40
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 14 tgtactccctccgtccgcaaatacttgtc 42
|||||||||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtccgcaaatacttgtc 31
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 62 gatgtatctagaactaatatacatctagatacatcc 97
||||||||||||||||| |||||||| |||||||||
Sbjct: 41 gatgtatctagaactaaaatacatcttgatacatcc 76
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 62 gatgtatctagaactaatatacatctagatacatcc 97
|||||||||| |||||| ||||||||||||||||||
Sbjct: 75 gatgtatctataactaaaatacatctagatacatcc 40
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggata 55
||||||||||||||| ||||||||||||| |||||||||
Sbjct: 111 tactccctccgtccgaaaatacttgtcattgaaatggata 72
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggat 54
|||||||||||||| || ||||||||||||||||||||
Sbjct: 5 tactccctccgtccagaattacttgtcatcaaaatggat 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 108 attttgatgacaagtatttccggccggagggagtat 143
|||||||||||||||| ||| || ||||||||||||
Sbjct: 39 attttgatgacaagtaattctggacggagggagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 62 gatgtatctagaactaatatacatctagatacatcc 97
||||| ||||||||||| ||||||||||||| ||||
Sbjct: 41 gatgtgtctagaactaaaatacatctagatatatcc 76
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 62 gatgtatctagaactaatatacatctagatacatcc 97
||||||||||||||| | ||||||||||||||||||
Sbjct: 75 gatgtatctagaactgaaatacatctagatacatcc 40
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
||||||||||||||| || ||||||||| ||||||||| | ||| |||||| ||||||
Sbjct: 121 tactccctccgtccggaattacttgtcaccaaaatggaaataaatgaatgtatttagaac 62
Query: 76 taa 78
|||
Sbjct: 61 taa 59
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggat 54
||||||||||||||| || |||||| ||| |||||||||
Sbjct: 5 tactccctccgtccggaattacttgacataaaaatggat 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 108 attttgatgacaagtatttccggccggagggagta 142
|||||| ||||||||| |||||| |||||||||||
Sbjct: 87 attttggtgacaagtaattccggacggagggagta 121
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 53 ataaaaagagatgtatctagaactaatatacatctagatacat 95
||||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 32 ataaaaatggatgtatctataactaaaatacatctagatacat 74
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtcatcaaaatggat 54
||||||||||||| || || |||||||||| |||||||||
Sbjct: 4 gtactccctccgttcggaattacttgtcataaaaatggat 43
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 63 atgtatctagaactaatatacatctagatacatc 96
|||||||||||||||| ||||| |||||||||||
Sbjct: 74 atgtatctagaactaaaatacaactagatacatc 41
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 72/86 (83%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 12 cttgtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatcta 71
||||||||||||||||||| ||||||||| | | ||||| ||| || | ||||||||||
Sbjct: 124 cttgtactccctccgtccggaaatacttgacctaaaaataaatataatg-gatgtatcta 66
Query: 72 gaactaatatacatctagatacatcc 97
|||||| ||| ||||||| |||||
Sbjct: 65 taactaaaataagtctagattcatcc 40
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 103 tatttattttgatgacaagtatttccggccggagggagta 142
|||||||||| | | ||||||||||||| |||||||||||
Sbjct: 81 tatttatttttaggtcaagtatttccggacggagggagta 120
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 50.1 bits (25), Expect = 9e-06
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 21 cctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaactaata 80
|||||||||| || ||||| || |||||||||| ||| |||||| ||||||||| |
Sbjct: 10 cctccgtccggaattacttatcgcaaaaatggatagaaatgaatgtatttagaactaaaa 69
Query: 81 tacatctagatacatcc 97
| |||||||||||||||
Sbjct: 70 tgcatctagatacatcc 86
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 63 atgtatctagaactaatatacatctagatacat 95
|||||||||||||||| ||| ||||||||||||
Sbjct: 52 atgtatctagaactaaaatatatctagatacat 84
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 62 gatgtatctagaactaatatacatctagatacatcc 97
||||||||||||||||| ||| |||||||||||||
Sbjct: 41 gatgtatctagaactaaaatatgtctagatacatcc 76
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtc 42
|||||||||||||||| |||||||||||
Sbjct: 4 gtactccctccgtccgaaaatacttgtc 31
Score = 48.1 bits (24), Expect = 4e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 13 ttgtactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctag 72
|||||||||||| ||||| || ||||||| | |||||||| |||| |||||| |||
Sbjct: 123 ttgtactccctctgtccggaattacttgtgc-cgaaatggattaaaatgaatgtatttag 65
Query: 73 aactaatatacatctagatacatc 96
|||||| |||| ||||||||||||
Sbjct: 64 aactaaaatacgtctagatacatc 41
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 66 tatctagaactaatatacatctagatacatcc 97
|||||| |||||| ||||||||||||||||||
Sbjct: 71 tatctaaaactaaaatacatctagatacatcc 40
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 66 tatctagaactaatatacatctagatacatcc 97
||||||||||||| |||| |||||||||||||
Sbjct: 45 tatctagaactaaaatacgtctagatacatcc 76
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 48.1 bits (24), Expect = 4e-05
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgtccgcaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 75
|||||||||||||| ||||||||||| | ||||| || | || ||||||||||| |||
Sbjct: 5 tactccctccgtccagaaatacttgtcctagaaatgaat-ataatagatgtatctataac 63
Query: 76 taatatacatctagatacat 95
||| ||| |||||||||||
Sbjct: 64 taaaataagtctagatacat 83
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 gtactccctccgtccgcaaatacttgtc 42
|||||||||||||||| |||||||||||
Sbjct: 4 gtactccctccgtccggaaatacttgtc 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 116 gacaagtatttccggccggagggagta 142
||||||||||||||| |||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 gtactccctccgtccgcaaatacttgt 41
|||||||||||||||| ||||||||||
Sbjct: 121 gtactccctccgtccggaaatacttgt 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 117 acaagtatttccggccggagggagta 142
|||||||||||||| |||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 gtactccctccgtccgcaaatacttgt 41
|||||||||||||||| ||||||||||
Sbjct: 138 gtactccctccgtccggaaatacttgt 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 117 acaagtatttccggccggagggagta 142
|||||||||||||| |||||||||||
Sbjct: 112 acaagtatttccggacggagggagta 137
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtccgcaaatacttgt 41
||||||||||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgt 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 117 acaagtatttccggccggagggagta 142
|||||||||||||| |||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 ttgtactccctccgtccgcaaatacttgtc 42
||||||||| |||||||| |||||||||||
Sbjct: 2 ttgtactccatccgtccgaaaatacttgtc 31
