miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY663391.1/33436-33528 4571:Triticum turgidum
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 36 gtagtgtcaaaaaacgtcttacattatgggacggagggagta 77
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 gtagtgtcaaaaaacgtcttacattatgggacggagggagta 89
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 40 tgtcaaaaaacgtcttacattatgggacggagggagta 77
||||||||||| || || ||||||||||||||||||||
Sbjct: 42 tgtcaaaaaacatcctatattatgggacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 gtactccctccgtcccataatgta 38
||||||||||||||||||||||||
Sbjct: 90 gtactccctccgtcccataatgta 67
>RF00906;MIR1122;DQ537335.1/54883-54975 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 35 tgtagtgtcaaaaaacgtcttacattatgggacggagggagtatat 80
|||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 47 tgtagtgtcaaaaagcgtcttacattatgggacggagggagtatat 2
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgta 38
|||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgta 27
>RF00906;MIR1122;FJ436986.1/65665-65790 37682:Aegilops tauschii
Length = 126
Score = 83.8 bits (42), Expect = 4e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatg-tagtgtcaaaaaacgtcttacattatgggacggagg 72
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataacactagtgtcaaaaaacgtcttacattatgggacggagg 62
>RF00906;MIR1122;AF459639.1/39710-39600 4568:Triticum monococcum
Length = 111
Score = 77.8 bits (39), Expect = 2e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 35 tgtagtgtcaaaaaacgtcttacattatgggacggagggagta 77
||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 65 tgtagtgtcaaaaaacgtcctacattatgggacggagggagta 107
Score = 75.8 bits (38), Expect = 9e-14
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 41 gtcaaaaaacgtcttacattatgggacggagggagtat 78
||||||||||||||||||||||||||||||||||||||
Sbjct: 41 gtcaaaaaacgtcttacattatgggacggagggagtat 4
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgtag 39
||||||||||||||||||||||||
Sbjct: 107 tactccctccgtcccataatgtag 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgta 38
|||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgta 27
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 37 tagtgtcaaaaaacgtcttaca 58
||||||||||||||||||||||
Sbjct: 63 tagtgtcaaaaaacgtcttaca 42
>RF00906;MIR1122;DQ247823.1/803-901 4487:Aegilops searsii
Length = 99
Score = 73.8 bits (37), Expect = 3e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 35 tgtagtgtcaaaaaacgtcttacattatgggacggagggagtata 79
|||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 47 tgtagtgtcaaaaaacgtcttacattatgggacgaaggtagtata 3
Score = 71.9 bits (36), Expect = 1e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 37 tagtgtcaaaaaacgtcttacattatgggacggagg 72
||||||||||||||||||||||||||||||||||||
Sbjct: 56 tagtgtcaaaaaacgtcttacattatgggacggagg 91
>RF00906;MIR1122;EF426564.1/124146-124054 4571:Triticum turgidum
Length = 93
Score = 69.9 bits (35), Expect = 5e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 35 tgtagtgtcaaaaaacgtcttacattatgggacggagggagta 77
|||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 47 tgtagtatcaaaaaacctcttacattatgggacggagggagta 5
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 37 tagtgtcaaaaaacgtcttacattatgggacggagggagta 77
|||||||||||| |||||||||||| ||| ||||||||||
Sbjct: 49 tagtgtcaaaaagtgtcttacattataggatggagggagta 89
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 gtactccctccgtcccataatgta 38
||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccataatgta 27
>RF00906;MIR1122;AJ234502.1/104-174 4513:Hordeum vulgare
Length = 71
Score = 69.9 bits (35), Expect = 5e-12
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgt-agtgtcaaaaaacgtcttacattatgggacggaggga 74
|||||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccataatatgagtgtcaaaaacgctcttatattatgggacggaggga 64
Query: 75 gta 77
|||
Sbjct: 65 gta 67
>RF00906;MIR1122;EU660903.1/8169-8251 4565:Triticum aestivum
(bread wheat)
Length = 83
Score = 67.9 bits (34), Expect = 2e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 37 tagtgtcaaaaaacgtcttacattatgggacggagggagtat 78
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 45 tagtgtcaaaaaacgtcctacattatgggactgagggagtat 4
Score = 48.1 bits (24), Expect = 2e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 46 aaaacgtcttacattatgggacggagggagta 77
||||||||||||||||| ||||||||||||||
Sbjct: 49 aaaacgtcttacattat-ggacggagggagta 79
>RF00906;MIR1122;DQ247832.1/803-901 4487:Aegilops searsii
Length = 99
Score = 67.9 bits (34), Expect = 2e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 35 tgtagtgtcaaaaaacgtcttacattatgggacggagggagtata 79
|||||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 47 tgtagtgtcanaaaacgtcttacattatgggacgaaggtagtata 3
Score = 65.9 bits (33), Expect = 8e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 37 tagtgtcaaaaaacgtcttacattatgggacggagg 72
|||||||| |||||||||||||||||||||||||||
Sbjct: 56 tagtgtcanaaaacgtcttacattatgggacggagg 91
>RF00906;MIR1122;FJ711031.1/1293-1203 4586:Psathyrostachys juncea
Length = 91
Score = 65.9 bits (33), Expect = 8e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 37 tagtgtcaaaaaacgtcttacattatgggacggagggagta 77
|||||||||||||||||||| |||||||||| |||||||||
Sbjct: 47 tagtgtcaaaaaacgtcttatattatgggacagagggagta 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/41 (92%), Gaps = 2/41 (4%)
Strand = Plus / Minus
Query: 38 agtgtcaaaaaacgtcttacattatgggacggagggagtat 78
||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 42 agtgtcaaaaaacgtcttaca--atgggacagagggagtat 4
>RF00906;MIR1122;EU187471.1/291-190 40247:Dasypyrum villosum
Length = 102
Score = 63.9 bits (32), Expect = 3e-10
Identities = 42/44 (95%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 35 tgtagtgtcaaaaaa-cgtcttacattatgggacggagggagta 77
||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 48 tgtagtgtcaaaaaaacgtcttacattatgggacggaggaagta 5
>RF00906;MIR1122;EU626553.1/80596-80503 4572:Triticum urartu
Length = 94
Score = 61.9 bits (31), Expect = 1e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 tgtagtgtcaaaaaacgtcttacattatgggacggagggagta 77
|||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 48 tgtagttttaaaaaatgtcttacattatgggacggagggagta 90
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 44 aaaaaacgtcttacattatgggacggagggagta 77
|||||||||||||||||||| ||| |||||||||
Sbjct: 38 aaaaaacgtcttacattatgagacagagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 gtactccctccgtcccataatgta 38
||||||||||||||||||||||||
Sbjct: 91 gtactccctccgtcccataatgta 68
>RF00906;MIR1122;AB298184.1/14323-14229 4565:Triticum aestivum
(bread wheat)
Length = 95
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 44 aaaaaacgtcttacattatgggacggagggagta 77
||||||||||||||||||||||||||||| ||||
Sbjct: 58 aaaaaacgtcttacattatgggacggaggaagta 91
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 37 tagtgtcaaaaaacgtcttacattatgggacggagggagtat 78
||||||||||| || || ||||||||||||| | ||||||||
Sbjct: 45 tagtgtcaaaagacatcctacattatgggacagcgggagtat 4
>RF00906;MIR1122;EF115142.1/468-377 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 92
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 37 tagtgtcaaaaaacgtcttacattatgggacggagggagta 77
|||||||||||||||||||| |||||| ||||||||||||
Sbjct: 48 tagtgtcaaaaaacgtcttatattatgttacggagggagta 88
>RF00906;MIR1122;FJ711046.1/1205-1295 220462:Leymus arenarius
Length = 91
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 37 tagtgtcaaaaaacgtcttacattatgggacggagggagta 77
|||||||||||||||||||| |||||||||| || ||||||
Sbjct: 45 tagtgtcaaaaaacgtcttatattatgggacagaaggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/41 (92%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 38 agtgtcaaaaaacgtcttacattatgggacggagggagtat 78
||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 50 agtgtcaaaaaacgtcttaca--atgggacagagggagtat 88
>RF00906;MIR1122;EU835198.1/120580-120672 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 35 tgtagtgtcaaaaaacgtcttacattatgggacggagggagta 77
|||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 47 tgtagtgtcaaaaatgttcttatattatgggacggagggagta 89
>RF00906;MIR1122;AM932680.1/129176-129267 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 45 aaaaacgtcttacattatgggacggagggagtat 78
|||||||||||||||||||||| ||| |||||||
Sbjct: 37 aaaaacgtcttacattatgggatggatggagtat 4
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 aaaaaacgtcttacattatgggacggagggagta 77
||||||||| |||| |||||||||||||||||||
Sbjct: 55 aaaaaacgtattacgttatgggacggagggagta 88
>RF00906;MIR1122;AJ507395.1/8084-8185 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 102
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 48 aacgtcttacattatgggacggagggagta 77
||||||||| ||||||||||||||||||||
Sbjct: 34 aacgtcttatattatgggacggagggagta 5
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 atgtactccctccgtcccataat 35
|||||||||||||||||||||||
Sbjct: 101 atgtactccctccgtcccataat 79
>RF00906;MIR1122;X80068.1/1038-939 4513:Hordeum vulgare
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 52 tcttacattatgggacggagggagtatatt 81
||||| ||||||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagtatatt 1
>RF00906;MIR1122;EF397435.1/125-217 4588:Lophopyrum elongatum
Length = 93
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 45 aaaaacgtcttacattatgggacggagggagta 77
|||||||||||||||||||||| |||||||||
Sbjct: 57 aaaaacgtcttacattatgggatagagggagta 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 aaaaacgtcttacattatgggacgga 70
|||||||| |||||||||||||||||
Sbjct: 37 aaaaacgtattacattatgggacgga 12
>RF00906;MIR1122;AAAA02003912.1/60341-60484 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 atgtactccctccgtcccataatgt 37
|||||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataatgt 26
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 26 acattatgggacggagggagta 5
>RF00906;MIR1122;AC215729.1/5950-6041 4537:Oryza punctata
Length = 92
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtatatt 81
|||| ||||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagtatatt 1
>RF00906;MIR1122;AAAA02021990.1/33218-33084 39946:Oryza sativa
Indica Group
Length = 135
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtatatt 81
|||| ||||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagtatatt 1
>RF00906;MIR1122;AAAA02017484.1/6201-6342 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtatatt 81
|||| ||||||||||||||||||||||||
Sbjct: 114 cttatattatgggacggagggagtatatt 142
>RF00906;MIR1122;AP008208.1/20971646-20971521 39947:Oryza sativa
Japonica Group
Length = 126
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 56 acattatgggacggagggagtatat 80
|||||||||||||||||||||||||
Sbjct: 26 acattatgggacggagggagtatat 2
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 acattatgggacggagggagtata 79
||||||||||||||||||||||||
Sbjct: 101 acattatgggacggagggagtata 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgt 26
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 122 tactccctccgtcccataatgt 101
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 52 tcttacattatgggacggagggagtatat 80
||||| |||||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagtatat 2
>RF00906;MIR1122;AAAA02020362.1/853-722 39946:Oryza sativa Indica
Group
Length = 132
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtatatt 81
|||| ||||||||||||||||||||||||
Sbjct: 104 cttatattatgggacggagggagtatatt 132
>RF00906;MIR1122;AP008211.1/23389262-23389121 39947:Oryza sativa
Japonica Group
Length = 142
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtatatt 81
|||| ||||||||||||||||||||||||
Sbjct: 114 cttatattatgggacggagggagtatatt 142
>RF00906;MIR1122;CT009735.1/55205-55297 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 38 agtgtcaaaaaacgtcttacattatgggacggagggagta 77
||||||||||| ||||| ||||||||||||||||||||
Sbjct: 50 agtgtcaaaaacgctcttatattatgggacggagggagta 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 37 tagtgtcaaaaaacgtcttacattatgggacggaggga 74
|||||||||||| ||||| |||||||||||||||||
Sbjct: 45 tagtgtcaaaaacgctcttatattatgggacggaggga 8
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 tgtactccctccgtcccataat 35
||||||||||||||||||||||
Sbjct: 91 tgtactccctccgtcccataat 70
>RF00906;MIR1122;FJ374604.1/80-162 4573:Aegilops speltoides
Length = 83
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 38 agtgtcaaaaaacgtcttacattatgggacggagggagta 77
||||||||||| ||||| ||||||||||||||||||||
Sbjct: 44 agtgtcaaaaacgctcttatattatgggacggagggagta 5
>RF00906;MIR1122;EU200767.1/2385-2293 37682:Aegilops tauschii
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 gtcttacattatgggacggagggagtat 78
|||||| |||||||||||||||||||||
Sbjct: 63 gtcttatattatgggacggagggagtat 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 45 aaaaacgtcttacattatgggacggagggagtat 78
||||| |||||| ||||||||| |||||||||||
Sbjct: 37 aaaaaggtcttatattatgggagggagggagtat 4
>RF00906;MIR1122;AAAA02021919.1/27572-27694 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 58 attatgggacggagggagtatatt 81
||||||||||||||||||||||||
Sbjct: 24 attatgggacggagggagtatatt 1
>RF00906;MIR1122;AACV01010936.1/15061-14959 39947:Oryza sativa
Japonica Group
Length = 103
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgtag 39
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgtag 28
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 55 tacattatgggacggagggagta 77
|||||||||||||||||||||||
Sbjct: 27 tacattatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 tgtactccctccgtcccataatgtag 39
||||||||||||| ||||||||||||
Sbjct: 101 tgtactccctccggcccataatgtag 76
>RF00906;MIR1122;AAAA02015439.1/1131-1234 39946:Oryza sativa
Indica Group
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgtag 39
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgtag 28
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 55 tacattatgggacggagggagta 77
|||||||||||||||||||||||
Sbjct: 27 tacattatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 tgtactccctccgtcccataatgtag 39
||||||||||||| ||||||||||||
Sbjct: 102 tgtactccctccggcccataatgtag 77
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagtata 79
||||| ||||||||||||||||||||||
Sbjct: 128 tcttatattatgggacggagggagtata 155
>RF00906;MIR1122;AP008215.1/10902261-10902381 39947:Oryza sativa
Japonica Group
Length = 121
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 aatgtactccctccgtcccataat 35
||||||||||||||||||||||||
Sbjct: 121 aatgtactccctccgtcccataat 98
>RF00906;MIR1122;AACV01021120.1/13659-13774 39947:Oryza sativa
Japonica Group
Length = 116
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgtag 39
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgtag 28
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgtag 39
||||||||||||||||||||||||
Sbjct: 112 tactccctccgtcccataatgtag 89
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 55 tacattatgggacggagggagta 77
|||||||||||||||||||||||
Sbjct: 27 tacattatgggacggagggagta 5
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tacattatgggacggagggagta 77
|||||||||||||||||||||||
Sbjct: 90 tacattatgggacggagggagta 112
>RF00906;MIR1122;AAAA02006653.1/17498-17400 39946:Oryza sativa
Indica Group
Length = 99
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 acattatgggacggagggagtata 79
||||||||||||||||||||||||
Sbjct: 74 acattatgggacggagggagtata 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccataatgt 74
>RF00906;MIR1122;AAAA02023828.1/150-266 39946:Oryza sativa Indica
Group
Length = 117
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtatat 80
|||| |||||||||||||||||||||||
Sbjct: 89 cttatattatgggacggagggagtatat 116
>RF00906;MIR1122;AC123518.2/65954-65790 39947:Oryza sativa
Japonica Group
Length = 165
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtatat 80
|||| |||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagtatat 2
>RF00906;MIR1122;AAAA02017713.1/95926-95807 39946:Oryza sativa
Indica Group
Length = 120
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 aatgtactccctccgtcccataat 35
||||||||||||||||||||||||
Sbjct: 120 aatgtactccctccgtcccataat 97
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagtat 78
||||| |||||||||||||||||||||
Sbjct: 213 tcttatattatgggacggagggagtat 239
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 52 tcttacattatgggacggagggagtat 78
||||| |||||||||||||||||||||
Sbjct: 27 tcttatattatgggacggagggagtat 1
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa
Japonica Group
Length = 239
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 52 tcttacattatgggacggagggagtat 78
||||| |||||||||||||||||||||
Sbjct: 27 tcttatattatgggacggagggagtat 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 214 cttatattatgggacggagggagtat 239
>RF00906;MIR1122;EU626553.1/26077-25985 4572:Triticum urartu
Length = 93
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagtat 78
||||| |||||||||||||||||||||
Sbjct: 64 tcttatattatgggacggagggagtat 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 35 tgtagtgtcaaaaaacgtcttacattatgggacggagggagtatat 80
||||||| |||||| ||||| |||||||||| ||||||||||||
Sbjct: 47 tgtagtgccaaaaacgttcttatattatgggacagagggagtatat 2
>RF00906;MIR1122;FJ436986.1/65183-65072 37682:Aegilops tauschii
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 39 gtgtcaaaaaacgtcttacattatgggacggagggagta 77
||||||||||| |||||||||| || ||| |||||||||
Sbjct: 43 gtgtcaaaaaatgtcttacattttgagacagagggagta 5
>RF00906;MIR1122;AF343492.1/1298-1206 58531:Aegilops speltoides
subsp. speltoides
Length = 93
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 35 tgtagtgtcaaaaaacgtcttacattatgggacggagggagta 77
|||||||||||||| | ||| ||||||||||||||||||||
Sbjct: 47 tgtagtgtcaaaaacgcttttatattatgggacggagggagta 89
>RF00906;MIR1122;AAAA02030950.1/26939-26775 39946:Oryza sativa
Indica Group
Length = 165
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtata 79
|||| ||||||||||||||||||||||
Sbjct: 137 cttatattatgggacggagggagtata 163
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 46 aaaacgtcttacattatgggacggagggagtatat 80
|||| ||||||||||||| |||||||||||||||
Sbjct: 36 aaaaagtcttacattatgaaacggagggagtatat 2
>RF00906;MIR1122;AAAA02006450.1/4529-4668 39946:Oryza sativa
Indica Group
Length = 140
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 55 tacattatgggacggagggagtatatt 81
||||||||| |||||||||||||||||
Sbjct: 27 tacattatgagacggagggagtatatt 1
>RF00906;MIR1122;AAAA02007939.1/46568-46414 39946:Oryza sativa
Indica Group
Length = 155
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 attatgggacggagggagtatat 80
|||||||||||||||||||||||
Sbjct: 24 attatgggacggagggagtatat 2
>RF00906;MIR1122;AAAA02033572.1/45748-45869 39946:Oryza sativa
Indica Group
Length = 122
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 atgtactccctccgtcccataat 35
|||||||||||||||||||||||
Sbjct: 121 atgtactccctccgtcccataat 99
>RF00906;MIR1122;AACV01004460.1/3202-3065 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 55 tacattatgggacggagggagtatatt 81
|||||||||||||||| ||||||||||
Sbjct: 27 tacattatgggacggatggagtatatt 1
>RF00906;MIR1122;AACV01010090.1/14054-14174 39947:Oryza sativa
Japonica Group
Length = 121
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgtactccctccgtcccataat 35
|||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataat 24
>RF00906;MIR1122;AAAA02027487.1/4806-4726 39946:Oryza sativa
Indica Group
Length = 81
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagtat 78
||||| |||||||||||||||||||||
Sbjct: 52 tcttatattatgggacggagggagtat 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagta 5
>RF00906;MIR1122;AC137993.2/27522-27654 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtata 79
|||| ||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagtata 3
>RF00906;MIR1122;AACV01020013.1/4046-4126 39947:Oryza sativa
Japonica Group
Length = 81
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 52 tcttacattatgggacggagggagtat 78
||||| |||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagtat 4
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 52 tcttatattatgggacggagggagta 77
>RF00906;MIR1122;AACV01003219.1/195-324 39947:Oryza sativa Japonica
Group
Length = 130
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 attatgggacggagggagtatat 80
|||||||||||||||||||||||
Sbjct: 107 attatgggacggagggagtatat 129
>RF00906;MIR1122;AACV01014972.1/11020-11117 39947:Oryza sativa
Japonica Group
Length = 98
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 acattatgggacggagggagtat 78
|||||||||||||||||||||||
Sbjct: 73 acattatgggacggagggagtat 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 94 tactccctccgtcccataatgt 73
>RF00906;MIR1122;AP004885.3/67265-67119 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagtat 78
||||| |||||||||||||||||||||
Sbjct: 118 tcttatattatgggacggagggagtat 144
>RF00906;MIR1122;AACV01022450.1/23564-23424 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtata 79
|||| ||||||||||||||||||||||
Sbjct: 113 cttatattatgggacggagggagtata 139
>RF00906;MIR1122;AL713936.4/62382-62493 4530:Oryza sativa (rice)
Length = 112
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtata 79
|||| ||||||||||||||||||||||
Sbjct: 84 cttatattatgggacggagggagtata 110
>RF00906;MIR1122;AP008212.1/30480161-30480258 39947:Oryza sativa
Japonica Group
Length = 98
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 56 acattatgggacggagggagtat 78
|||||||||||||||||||||||
Sbjct: 26 acattatgggacggagggagtat 4
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgt 26
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 94 tactccctccgtcccataatgt 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 73 acattatgggacggagggagta 94
>RF00906;MIR1122;AC133860.5/153753-153857 39947:Oryza sativa
Japonica Group
Length = 105
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 tgtactccctccgtcccataatg 36
|||||||||||||||||||||||
Sbjct: 103 tgtactccctccgtcccataatg 81
>RF00906;MIR1122;AP008216.1/17487566-17487411 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 attatgggacggagggagtatat 80
|||||||||||||||||||||||
Sbjct: 24 attatgggacggagggagtatat 2
>RF00906;MIR1122;AACV01015661.1/3431-3301 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 52 tcttacattatgggacggagggagtat 78
||||| |||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagtat 4
>RF00906;MIR1122;AP008215.1/3184216-3184308 39947:Oryza sativa
Japonica Group
Length = 93
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtata 79
|||| ||||||||||||||||||||||
Sbjct: 65 cttatattatgggacggagggagtata 91
>RF00906;MIR1122;ABRL01000725.1/6908-6752 65489:Oryza barthii
Length = 157
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 attatgggacggagggagtatat 80
|||||||||||||||||||||||
Sbjct: 24 attatgggacggagggagtatat 2
>RF00906;MIR1122;AAAA02004945.1/9210-9077 39946:Oryza sativa Indica
Group
Length = 134
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 attatgggacggagggagtatat 80
|||||||||||||||||||||||
Sbjct: 111 attatgggacggagggagtatat 133
>RF00906;MIR1122;AP008212.1/26495633-26495543 39947:Oryza sativa
Japonica Group
Length = 91
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 atgtactccctccgtcccataat 35
|||||||||||||||||||||||
Sbjct: 90 atgtactccctccgtcccataat 68
>RF00906;MIR1122;AL606607.3/13860-13742 39947:Oryza sativa
Japonica Group
Length = 119
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgtactccctccgtcccataat 35
|||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataat 24
>RF01058;MIR806;AAAA02003871.1/18652-18886 39946:Oryza sativa Indica
Group
Length = 235
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 210 cttatattatgggacggagggagtat 235
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 218 cttatattatgggacggagggagtat 243
>RF01058;MIR806;AAAA02031014.1/26426-26184 39946:Oryza sativa
Indica Group
Length = 243
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 218 cttatattatgggacggagggagtat 243
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa
Indica Group
Length = 242
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 218 tcttatattatgggacggagggagta 243
>RF01058;MIR806;AAAA02000839.1/35471-35708 39946:Oryza sativa
Indica Group
Length = 238
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
>RF01058;MIR806;AP004797.3/60701-60942 39947:Oryza sativa Japonica
Group
Length = 242
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 217 cttatattatgggacggagggagtat 242
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 219 cttatattatgggacggagggagtat 244
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 210 cttatattatgggacggagggagtat 235
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 217 cttatattatgggacggagggagtat 242
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatgggacggagggagtat 1
>RF00906;MIR1122;CR954190.2/110040-110176 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||||||| |||||||||||||||||
Sbjct: 29 cttacattttgggacggagggagtat 4
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||||||| |||||||||||||||||
Sbjct: 109 cttacattttgggacggagggagtat 134
>RF00906;MIR1122;DQ871219.1/56040-55948 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 64 tcttatattatgggacggagggagta 89
>RF00906;MIR1122;AY013246.1/69877-69969 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 64 tcttatattatgggacggagggagta 89
>RF00906;MIR1122;CT009625.1/19364-19456 37682:Aegilops tauschii
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 64 tcttatattatgggacggagggagta 89
>RF00906;MIR1122;EF059989.1/54267-54145 29664:Brachypodium
sylvaticum
Length = 123
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 tgtactccctccgtcccataat 35
||||||||||||||||||||||
Sbjct: 121 tgtactccctccgtcccataat 100
>RF00906;MIR1122;ABRL01000294.1/23842-24000 65489:Oryza barthii
Length = 159
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 ttatgggacggagggagtatat 80
||||||||||||||||||||||
Sbjct: 137 ttatgggacggagggagtatat 158
>RF00906;MIR1122;AACV01001132.1/47322-47207 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 gtactccctccgtcccataatgtagt 40
||||||||||||||||||||| ||||
Sbjct: 4 gtactccctccgtcccataatatagt 29
>RF00906;MIR1122;AC105928.2/150423-150279 39947:Oryza sativa
Japonica Group
Length = 145
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 141 tactccctccgtcccataatgt 120
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 120 acattatgggacggagggagta 141
>RF00906;MIR1122;AAAA02026860.1/4609-4722 39946:Oryza sativa Indica
Group
Length = 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 ttatgggacggagggagtatat 80
||||||||||||||||||||||
Sbjct: 92 ttatgggacggagggagtatat 113
>RF00906;MIR1122;AAAA02022617.1/34247-34092 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgtactccctccgtcccataat 35
||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtcccataat 24
>RF00906;MIR1122;AACV01015246.1/27552-27707 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 128 cttatattatgggacggagggagtat 153
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 129 cttatattatgggacggagggagtat 154
>RF00906;MIR1122;AAAA02016804.1/14776-14638 39946:Oryza sativa
Indica Group
Length = 139
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 110 tcttatattatgggacggagggagta 135
>RF00906;MIR1122;AP008208.1/30008764-30008885 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 93 tcttatattatgggacggagggagta 118
>RF00906;MIR1122;AAAA02007279.1/3361-3494 39946:Oryza sativa Indica
Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 105 tcttatattatgggacggagggagta 130
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa
Indica Group
Length = 154
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 59 ttatgggacggagggagtatat 80
||||||||||||||||||||||
Sbjct: 23 ttatgggacggagggagtatat 2
>RF00906;MIR1122;AAAA02023860.1/3747-3613 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagtat 4
>RF00906;MIR1122;AACV01025590.1/274-429 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 ttatgggacggagggagtatat 80
||||||||||||||||||||||
Sbjct: 134 ttatgggacggagggagtatat 155
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 129 cttatattatgggacggagggagtat 154
>RF00906;MIR1122;AAAA02039729.1/233-133 39946:Oryza sativa Indica
Group
Length = 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 26 acattatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgt 26
>RF00906;MIR1122;AP003239.3/11814-11971 39947:Oryza sativa Japonica
Group
Length = 158
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 154 tactccctccgtcccataatgt 133
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 133 acattatgggacggagggagta 154
>RF00906;MIR1122;AAAA02018486.1/27307-27424 39946:Oryza sativa
Indica Group
Length = 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 89 tcttatattatgggacggagggagta 114
>RF00906;MIR1122;AL512542.2/7629-7514 4530:Oryza sativa (rice)
Length = 116
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagtat 4
>RF00906;MIR1122;AAAA02010985.1/48487-48349 39946:Oryza sativa
Indica Group
Length = 139
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 135 tactccctccgtcccataatgt 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 114 acattatgggacggagggagta 135
>RF00906;MIR1122;AAAA02017627.1/6518-6673 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 gtactccctccgtcccataatgtagt 40
||||||||||||||||||||| ||||
Sbjct: 4 gtactccctccgtcccataatatagt 29
>RF00906;MIR1122;AAAA02020252.1/431-548 39946:Oryza sativa Indica
Group
Length = 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 90 cttatattatgggacggagggagtat 115
>RF00906;MIR1122;AP008207.1/20312711-20312849 39947:Oryza sativa
Japonica Group
Length = 139
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 26 acattatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgt 26
>RF00906;MIR1122;AAAA02000637.1/653-774 39946:Oryza sativa Indica
Group
Length = 122
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 tacattatgggacggagggagtatat 80
||||||||||||| ||||||||||||
Sbjct: 96 tacattatgggacagagggagtatat 121
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa Japonica
Group
Length = 140
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 111 tcttatattatgggacggagggagta 136
>RF00906;MIR1122;AP002483.1/24463-24606 39947:Oryza sativa
Japonica Group
Length = 144
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 59 ttatgggacggagggagtatat 80
||||||||||||||||||||||
Sbjct: 23 ttatgggacggagggagtatat 2
>RF00906;MIR1122;AACV01001496.1/5025-4887 39947:Oryza sativa
Japonica Group
Length = 139
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 26 acattatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgt 26
>RF00906;MIR1122;AP004994.2/6845-6714 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 104 cttatattatgggacggagggagtat 129
>RF00906;MIR1122;AAAA02020253.1/35204-35082 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 95 cttatattatgggacggagggagtat 120
>RF00906;MIR1122;AP004361.4/1077-1207 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 127 tactccctccgtcccataatgt 106
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 106 acattatgggacggagggagta 127
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 atgtactccctccgtcccataa 34
||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataa 23
>RF00906;MIR1122;AL662938.3/6940-7051 39947:Oryza sativa Japonica
Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cttacattatgggacggagggagtat 78
|||||||| |||||||||||||||||
Sbjct: 29 cttacattttgggacggagggagtat 4
>RF00906;MIR1122;AACV01018687.1/6312-6175 39947:Oryza sativa
Japonica Group
Length = 138
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 atgtactccctccgtcccataa 34
||||||||||||||||||||||
Sbjct: 2 atgtactccctccgtcccataa 23
>RF00906;MIR1122;AP008207.1/1012082-1012198 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 88 tcttatattatgggacggagggagta 113
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 128 tcttatattatgggacggagggagta 153
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 tgtactccctccgtcccataat 35
||||||||||||||||||||||
Sbjct: 155 tgtactccctccgtcccataat 134
>RF00906;MIR1122;AP004457.2/96948-96835 39947:Oryza sativa Japonica
Group
Length = 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 ttatgggacggagggagtatat 80
||||||||||||||||||||||
Sbjct: 92 ttatgggacggagggagtatat 113
>RF00906;MIR1122;AAAA02003361.1/12742-12901 39946:Oryza sativa
Indica Group
Length = 160
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagta 5
>RF00906;MIR1122;AP008211.1/22648108-22648219 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgtactccctccgtcccataat 35
||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtcccataat 24
>RF00906;MIR1122;AC137589.2/147211-147089 39947:Oryza sativa
Japonica Group
Length = 123
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 attatgggacggagggagtata 79
||||||||||||||||||||||
Sbjct: 100 attatgggacggagggagtata 121
>RF00906;MIR1122;AAAA02008004.1/32040-31914 39946:Oryza sativa
Indica Group
Length = 127
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtcccataatgt 37
||||||||||||||||||||||
Sbjct: 123 tactccctccgtcccataatgt 102
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 acattatgggacggagggagta 77
||||||||||||||||||||||
Sbjct: 102 acattatgggacggagggagta 123
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 51 gtcttacattatgggacggagggagtatat 80
||||||||||||| |||||||||||||||
Sbjct: 98 gtcttacattatgaaacggagggagtatat 127
>RF00906;MIR1122;AP004706.3/101051-100895 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 129 cttatattatgggacggagggagtat 154
>RF00906;MIR1122;AC134348.2/54043-54161 39947:Oryza sativa Japonica
Group
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tcttacattatgggacggagggagta 77
||||| ||||||||||||||||||||
Sbjct: 90 tcttatattatgggacggagggagta 115
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cttacattatgggacggagggagtat 78
|||| |||||||||||||||||||||
Sbjct: 129 cttatattatgggacggagggagtat 154