miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 143 bits (72), Expect = 5e-34
Identities = 87/92 (94%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 96 cctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagttgtactaag 37
Query: 72 cttgagacagttattttgggacggagggagta 103
||||||||| ||||||||||||||||||||||
Sbjct: 36 cttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
|||||||| ||||||||||||||||||||||
Sbjct: 71 ttgagacatttattttgggacggagggagta 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaa 37
||||||||||| ||||||||||||||
Sbjct: 10 cctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 135 bits (68), Expect = 1e-31
Identities = 86/92 (93%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||| ||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 96 cctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaggttgtactaag 37
Query: 72 cttgagacagttattttgggacggagggagta 103
||||||||| ||||||||||||||||||||||
Sbjct: 36 cttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
|||||||| ||||||||||||||||||||||
Sbjct: 71 ttgagacatttattttgggacggagggagta 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaa 37
||||||||||| ||||||||||||||
Sbjct: 10 cctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 129 bits (65), Expect = 8e-30
Identities = 86/93 (92%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||||||||| ||||||||| ||||| |||||||||||||||||| |
Sbjct: 96 cctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgtactagg 37
Query: 72 cttgagacagttattttgggacggagggagtac 104
||||||||| |||||||| ||||||||||||||
Sbjct: 36 cttgagacacttattttgagacggagggagtac 4
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 76 agacagttattttgggacggagggagtac 104
||||| |||||||||||||||||||||||
Sbjct: 74 agacacttattttgggacggagggagtac 102
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 127 bits (64), Expect = 3e-29
Identities = 85/92 (92%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||| ||| |||||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 10 cctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgtactaag 69
Query: 72 cttgagacagttattttgggacggagggagta 103
||||||| ||||||||||| ||||||||||||
Sbjct: 70 cttgagatagttattttggaacggagggagta 101
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 73 ttgagacagttattttgggacggagggagta 103
|||||||| ||||||||| ||||||||||||
Sbjct: 35 ttgagacacttattttggaacggagggagta 5
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 123 bits (62), Expect = 5e-28
Identities = 83/90 (92%)
Strand = Plus / Plus
Query: 14 tccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaagct 73
||||||||| |||||||||||||| ||| | |||||||||||||||||||||||||| |
Sbjct: 12 tccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgtactaaggt 71
Query: 74 tgagacagttattttgggacggagggagta 103
||||||| ||||||||||||||||||||||
Sbjct: 72 tgagacacttattttgggacggagggagta 101
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 73 ttgagacagttattttgggacggagggagtact 105
|||||||| ||||||||||||||| ||||||||
Sbjct: 35 ttgagacacttattttgggacggaaggagtact 3
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaac 38
||||||||||| |||||||||||||||
Sbjct: 96 cctccgtcccaaaataagtgtctcaac 70
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 123 bits (62), Expect = 5e-28
Identities = 80/86 (93%)
Strand = Plus / Minus
Query: 18 tcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaagcttgag 77
||||| ||||||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 90 tcccaaaataagtgtctcaactttgtactagttctagtacaaagttgtactaggcttgag 31
Query: 78 acagttattttgggacggagggagta 103
|||||||||||||||||||| |||||
Sbjct: 30 acagttattttgggacggagtgagta 5
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 119 bits (60), Expect = 8e-27
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||||||||||| ||||||| ||||||||||| ||| ||||||||||
Sbjct: 95 cctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgtactaag 37
Query: 72 cttgagacagttattttgggacggagggagta 103
|||||||| ||||||||||||||||||||||
Sbjct: 36 gttgagacacttattttgggacggagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 74 tgagacagttattttgggacggagggagta 103
||||||| ||||||||||||||||||||||
Sbjct: 71 tgagacacttattttgggacggagggagta 100
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaac 38
||||||||||| |||||||||||||||
Sbjct: 10 cctccgtcccaaaataagtgtctcaac 36
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 119 bits (60), Expect = 8e-27
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 24 aataagtgtctcaactttgtagtaactctagtacaaagttgtactaagcttgagacagtt 83
||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 84 aataagtgtctcaactttgtactagctctactacaaagttgtactaagcttgagacagtt 25
Query: 84 attttgggacggagggagta 103
|||||| || ||||||||||
Sbjct: 24 attttgagatggagggagta 5
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 119 bits (60), Expect = 8e-27
Identities = 84/92 (91%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||||||||||||||||||| || || ||||||||| || ||||||
Sbjct: 96 cctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattacactaag 37
Query: 72 cttgagacagttattttgggacggagggagta 103
||||||||| ||||||||||||||||||||||
Sbjct: 36 cttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
|||||||| ||||||||||||||||||||||
Sbjct: 71 ttgagacacttattttgggacggagggagta 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaa 37
||||||||||| ||||||||||||||
Sbjct: 10 cctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 117 bits (59), Expect = 3e-26
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 14 tccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaagct 73
||||||||| |||||||||||||||||| || || || ||||||||| ||||| |||| |
Sbjct: 12 tccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgtattaagtt 71
Query: 74 tgagacagttattttgggacggagggagtac 104
|||||||||||||||||||||||||||||||
Sbjct: 72 tgagacagttattttgggacggagggagtac 102
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 73 ttgagacagttattttgggacggagggagta 103
|||||||| ||||||||||||||| ||||||
Sbjct: 35 ttgagacacttattttgggacggatggagta 5
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 111 bits (56), Expect = 2e-24
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||| ||||| ||||||||||||||||||||| || |||||||||||| || |||||||
Sbjct: 96 cctccatcccaaaataagtgtctcaactttgtactatctctagtacaaatttttactaag 37
Query: 72 cttgagacagttattttgggacggagggagta 103
|| ||||| ||||||||||||||||||||||
Sbjct: 36 ctcaagacacttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagtac 104
|||||||| ||||||||||| |||||||||||
Sbjct: 71 ttgagacacttattttgggatggagggagtac 102
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 111 bits (56), Expect = 2e-24
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||| ||||| ||||| ||||||||||||||| || ||||||||||||||||||| |||
Sbjct: 95 cctccatcccaaaataactgtctcaactttgtactagctctagtacaaagttgtacaaag 36
Query: 72 cttgagacagttattttgggacggagggagta 103
||||||||||||||||| |||||||||||||
Sbjct: 35 -ttgagacagttattttgagacggagggagta 5
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagtacta 106
|||||||||||||||||||| |||||||||||||
Sbjct: 70 ttgagacagttattttgggatggagggagtacta 103
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
|||||||| || ||||||| |||||||||| | || |||||||| ||||||||||||||
Sbjct: 96 cctccgtctcaaaataagtatctcaactttacactagctctagtataaagttgtactaag 37
Query: 72 cttgagacagttattttgggacggagggagtact 105
|||||| ||||||||||||||||||||||||||
Sbjct: 36 tttgagaaagttattttgggacggagggagtact 3
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
|||||||| || ||||| ||||||||||||||| || |||||||||||||||||||||||
Sbjct: 96 cctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgtactaag 37
Query: 72 cttgagacagttattttgggacggaggga 100
||| ||||| ||||||| |||| ||||||
Sbjct: 36 cttaagacacttattttaggaccgaggga 8
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
||||||||||||||||| |||||||||||||
Sbjct: 71 ttgagacagttattttgagacggagggagta 101
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 103 bits (52), Expect = 5e-22
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||| ||||||||||||||| || |||||||||||| |||||||| |
Sbjct: 96 cctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattgtactacg 37
Query: 72 cttgagacagttattttgggacggagggagta 103
|| ||||| ||||||||| ||||||||||||
Sbjct: 36 ctcaagacacttattttggaacggagggagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagtac 104
||||||||||||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagtac 102
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 103 bits (52), Expect = 5e-22
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||| |||||||||||| || || ||||||| ||| || |||||||
Sbjct: 96 cctccgtcccaaaataactgtctcaactttatactagatctagtataaatttatactaag 37
Query: 72 cttgagacagttattttgggacggagggagta 103
||| ||||||||||||||||||||||||||||
Sbjct: 36 cttaagacagttattttgggacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
|||||||||||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 99.6 bits (50), Expect = 7e-21
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 10 ttcctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtacta 69
||||||||||||| ||||| ||||||||||||||| || | ||||||||| ||||| ||
Sbjct: 98 ttcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaattgtatta 39
Query: 70 agcttgagacagttattttgggacggagggagta 103
||||| ||||| ||||||||| ||||||||||||
Sbjct: 38 agcttaagacacttattttggaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagtac 104
|||||||||||||||||||||||||| |||||
Sbjct: 71 ttgagacagttattttgggacggaggaagtac 102
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 99.6 bits (50), Expect = 7e-21
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
|||||||| || ||||||| ||||| |||| | || |||||||| ||||||||||||||
Sbjct: 96 cctccgtctcaaaataagtatctcagctttacactagctctagtataaagttgtactaag 37
Query: 72 cttgagacagttattttgggacggagggagtact 105
|||||| ||||||||||||||||||||||||||
Sbjct: 36 tttgagaaagttattttgggacggagggagtact 3
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||| |||||||||||| || || |||| || ||| || |||||||
Sbjct: 96 cctccgtcccaaaataactgtctcaactttatactagatctaatataaatttatactaag 37
Query: 72 cttgagacagttattttgggacggagggagta 103
||| ||||||||||||||||||||||||||||
Sbjct: 36 cttaagacagttattttgggacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
|||||||||||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 93.7 bits (47), Expect = 4e-19
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 24 aataagtgtctcaactttgtagtaactctagtacaaagttgtactaagcttgagacagtt 83
||||| ||||||||| ||||| || |||||||||||| |||||||||| || ||||| ||
Sbjct: 84 aataactgtctcaacattgtactagctctagtacaaaattgtactaagattaagacactt 25
Query: 84 attttgggacggagggagtacta 106
|||||| ||||||||||||||||
Sbjct: 24 attttgagacggagggagtacta 2
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
||||||||||||||||| ||| |||||||||
Sbjct: 71 ttgagacagttattttgagacagagggagta 101
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 103 cctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgtactaag 44
Query: 72 ct 73
||
Sbjct: 43 ct 42
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
|||||||| ||||||||||| ||||||||||
Sbjct: 78 ttgagacacttattttgggatggagggagta 108
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 87.7 bits (44), Expect = 3e-17
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||||||||||||||||||| || || || |||||||||||||||
Sbjct: 10 cctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgtactaga 69
Query: 72 cttgagacagttattttgggacggagggagta 103
|||||||| |||||||| || |||| |||||
Sbjct: 70 gttgagacacttattttgagatggagtgagta 101
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 73 ttgagacagttattttgggacggagggag 101
|||||||| ||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggag 7
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 87.7 bits (44), Expect = 3e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 31 gtctcaactttgtagtaactctagtacaaagttgtactaagcttgagacagttattttgg 90
|||||||||||||| ||| | |||| ||||||||||||||| |||||||| |||||||||
Sbjct: 77 gtctcaactttgtactaaatttagtgcaaagttgtactaaggttgagacacttattttgg 18
Query: 91 gacggagggagtacta 106
|||| |||||| ||||
Sbjct: 17 gacgaagggagaacta 2
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||| |||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 144 cctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgtactaag 85
Query: 72 cttgaga 78
||||||
Sbjct: 84 gttgaga 78
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 72 cttgagacagttattttgggacggagggagta 103
||||||||||||||||||||||||||||||||
Sbjct: 118 cttgagacagttattttgggacggagggagta 149
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 87.7 bits (44), Expect = 3e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 24 aataagtgtctcaactttgtagtaactctagtacaaagttgtactaagcttgagacagtt 83
||||| ||||||||||||||| || |||||||||||||||||||||||| ||| ||| ||
Sbjct: 84 aataaatgtctcaactttgtactagctctagtacaaagttgtactaagcatgaaacaatt 25
Query: 84 attttgggacggagggagta 103
|||||| | ||||||||||
Sbjct: 24 attttgaaatggagggagta 5
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 79.8 bits (40), Expect = 7e-15
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| |||| ||||| ||||||||| || ||| ||| ||| ||||||||||
Sbjct: 96 cctccgtcccaaaatatctgtcttaactttgtactagctcatgtataaaattgtactaag 37
Query: 72 cttgagacagttattttgggacggaggg 99
||| ||||| ||||||||||||||||||
Sbjct: 36 cttaagacacttattttgggacggaggg 9
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 76 agacagttattttgggacggagggagta 103
|||||| |||||||||||||||||||||
Sbjct: 74 agacagatattttgggacggagggagta 101
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 77.8 bits (39), Expect = 3e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 52 tagtacaaagttgtactaagcttgagacagttattttgggacggagggagtacta 106
|||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 49 tagtgcaaagttatactaagcttgagacaattattttgagacggagggagtacta 103
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
|||||||| || |||| ||||||||||||| || |||||||| ||||||||||||||
Sbjct: 10 cctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagttgtactaag 69
Query: 72 cttgagacagttattttgggac 93
|||||| ||||||||||||||
Sbjct: 70 tttgagaaagttattttgggac 91
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 77 gacagttattttgggacggagggagtact 105
|||||||||||||||||||||||||||||
Sbjct: 89 gacagttattttgggacggagggagtact 117
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 52 tagtacaaagttgtactaagcttgagacagttattttgggacggagggag 101
|||||||||||| |||||| |||||||| ||||||||||||||||||||
Sbjct: 56 tagtacaaagttatactaaagttgagacacttattttgggacggagggag 7
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaacttt 41
||||||||||| ||||||||||||||||||
Sbjct: 10 cctccgtcccaaaataagtgtctcaacttt 39
Score = 52.0 bits (26), Expect = 1e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 62 ttgtactaagcttgagacagttattttgggacggagggagta 103
|||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 49 ttgtactaag-ttgagacacttattttgggacggaggaagta 89
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttgtactaag 71
||||||||||| ||||| ||||| |||||||| || |||||||| ||| || |||||||
Sbjct: 96 cctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattatactaag 37
Query: 72 cttgagacagttatttt 88
||| ||||| |||||||
Sbjct: 36 cttaagacacttatttt 20
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 76 agacagttattttgggacggagggagta 103
||||| ||||||||||||||||||||||
Sbjct: 74 agacaattattttgggacggagggagta 101
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 24 aataagtgtctcaactttgtagtaactctagtacaaagttgtactaagcttgagacagtt 83
||||| ||||| ||||||||| || || || || ||| || ||||||| || ||||| ||
Sbjct: 22 aataactgtcttaactttgtactagctttactataaatttatactaagtttaagacattt 81
Query: 84 attttgggacggagggagtacta 106
|||||| ||||||||||||||||
Sbjct: 82 attttgcgacggagggagtacta 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 76 agacagttattttgggacggagggagtactat 107
||||||||||||||| || |||||||||||||
Sbjct: 32 agacagttattttggaacagagggagtactat 1
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 58.0 bits (29), Expect = 2e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaactctagtacaaagttg 64
||||||||||| | |||||| ||||||||| || ||||| |||||||||||||
Sbjct: 85 cctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttg 33
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 80 agttattttgggacggagggagtactat 107
||||||||||||||||||||||||||||
Sbjct: 28 agttattttgggacggagggagtactat 1
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaactttgtagtaact 50
||||||||||| |||||||| |||||||||||| |||||
Sbjct: 10 cctccgtcccaaaataagtgactcaactttgtactaact 48
Score = 50.1 bits (25), Expect = 6e-06
Identities = 48/53 (90%), Gaps = 2/53 (3%)
Strand = Plus / Minus
Query: 52 tagtacaaagtt-gtactaagcttgagacagttattttgggacggagggagta 103
|||||||||||| |||| ||| ||||| || ||||||||||||||||||||||
Sbjct: 56 tagtacaaagttagtacaaag-ttgagtcacttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 13 ctccgtcccataataagtgtctcaactttgtagtaact 50
|||| ||||| |||||||| |||||||||||| |||||
Sbjct: 122 ctccatcccaaaataagtgactcaactttgtactaact 85
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 79 cagttattttgggacggagggagtact 105
|||||||||||||||||||||||||||
Sbjct: 29 cagttattttgggacggagggagtact 3
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 52.0 bits (26), Expect = 1e-06
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 33 ctcaactttgtagtaactctagtacaaagtt-gtactaagcttgagacagttattttggg 91
|||||||||||| ||||| ||||||||| || |||| ||| ||||| || ||||||||
Sbjct: 75 ctcaactttgtactaactatagtacaaaattagtacaaag-ttgagtcatctattttgga 17
Query: 92 acggagggagtact 105
||||||||||||||
Sbjct: 16 acggagggagtact 3
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 cctccgtcccataataagtgtctcaactttgta 44
||||||||||| |||||||| ||||||||||||
Sbjct: 95 cctccgtcccaaaataagtgactcaactttgta 63
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
||||| || ||||||||||||||||||||||
Sbjct: 70 ttgagtcacttattttgggacggagggagta 100
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagtacta 106
|||||||||||||||||||||||||
Sbjct: 90 ttattttgggacggagggagtacta 114
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 75 gagacagttattttgggacggagggagta 103
|||||| ||||||||||||||||||||||
Sbjct: 33 gagacacttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtct-caactttgta 44
||||||||||| ||||||||||| ||||||||||
Sbjct: 10 cctccgtcccaaaataagtgtctccaactttgta 43
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 48.1 bits (24), Expect = 2e-05
Identities = 80/95 (84%), Gaps = 4/95 (4%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtg--tctcaactttgtagtaactctagtacaaagtt-gtact 68
||||||||||| |||||||| |||||||||| || || | ||||||||| || ||||
Sbjct: 10 cctccgtcccaaaataagtggatctcaactttatactatttttagtacaaaattagtaca 69
Query: 69 aagcttgagacagttattttgggacggagggagta 103
||| ||||| || |||||| |||||||||||||||
Sbjct: 70 aag-ttgagtcacttatttcgggacggagggagta 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 33 ctcaactttgtagtaactctagtacaaagttg 64
|||||||||||| ||||| |||||||||||||
Sbjct: 64 ctcaactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 33 ctcaactttgtagtaactctagtacaaagttg 64
|||||||||||| ||||| |||||||||||||
Sbjct: 64 ctcaactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagtac 104
||||| || |||||||||||||||||||||||
Sbjct: 81 ttgagtcacttattttgggacggagggagtac 112
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 64 gtactaagcttgagacagttattttgggacggagggagta 103
||||||| ||| |||| ||||||||||||||||||||||
Sbjct: 44 gtactaaatttgcgacacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 77 gacagttattttgggacggagggagta 103
|||| ||||||||||||||||||||||
Sbjct: 76 gacacttattttgggacggagggagta 102
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 agttattttgggacggagggagta 103
||||||||||||||||||||||||
Sbjct: 133 agttattttgggacggagggagta 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AP003267.3/20551-20679 39947:Oryza sativa Japonica
Group
Length = 129
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtacta 106
||||||||||||||||||||||||
Sbjct: 105 tattttgggacggagggagtacta 128
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 agttattttgggacggagggagta 103
||||||||||||||||||||||||
Sbjct: 86 agttattttgggacggagggagta 109
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 83 tattttgggacggagggagtacta 106
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtacta 2
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa Japonica
Group
Length = 246
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagtac 104
|||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagtac 1
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagtac 104
|||||||||||||||||||||||
Sbjct: 215 ttattttgggacggagggagtac 237
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagta 103
||||| || ||||||||||||||||||||||
Sbjct: 82 ttgagtcacttattttgggacggagggagta 112
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 84 attttgggacggagggagtacta 106
|||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtacta 2
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 46.1 bits (23), Expect = 9e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 53 agtacaaagttgtactaagcttgagacagttattttgggacggagggagta 103
|||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 51 agtacaaagttgtactaaagcaaagacacttattttgggatggagggagta 101
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtact 110
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagtac 104
|||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagtac 110
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 111 tattttgggacggagggagtact 133
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa Indica
Group
Length = 92
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtact 3
>RF00906;MIR1122;AC090873.4/89374-89493 4530:Oryza sativa (rice)
Length = 120
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtact 3
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 89 tattttgggacggagggagtact 111
>RF00906;MIR1122;AAAA02006623.1/10234-10353 39946:Oryza sativa
Indica Group
Length = 120
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 96 tattttgggacggagggagtact 118
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa Japonica
Group
Length = 97
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagtac 104
|||||||||||||||||||||||
Sbjct: 72 ttattttgggacggagggagtac 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 76 tattttgggacggagggagtact 98
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa Indica
Group
Length = 100
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtact 3
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtact 3
>RF00906;MIR1122;AAAA02016947.1/4733-4836 39946:Oryza sativa Indica
Group
Length = 104
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtact 3
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtact 155
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagtac 104
|||||||||||||||||||||||
Sbjct: 72 ttattttgggacggagggagtac 94
>RF00906;MIR1122;AC120987.2/63054-63157 39947:Oryza sativa Japonica
Group
Length = 104
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtact 105
|||||||||||||||||||||||
Sbjct: 80 tattttgggacggagggagtact 102
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 223 ttattttgggacggagggagta 244
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa Japonica
Group
Length = 247
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 224 ttattttgggacggagggagta 245
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 219 ttattttgggacggagggagta 240
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 219 ttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 218 ttattttgggacggagggagta 239
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 219 ttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 219 ttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 13 ctccgtcccataataagtgtctcaactttgtagtaact 50
|||||||||| | |||||| |||||||||||| |||||
Sbjct: 11 ctccgtcccaaagtaagtgactcaactttgtactaact 48
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 17 gtcccataataagtgtctcaactttgtagtaact 50
|||||| |||||||| |||||||||||| |||||
Sbjct: 87 gtcccaaaataagtgactcaactttgtactaact 54
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 cctccgtcccataataagtgtctcaactttgtag 45
||||||||||| | |||||| |||||||||||||
Sbjct: 10 cctccgtcccaaattaagtgactcaactttgtag 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 73 ttgagacagttattttgggacggagggagtacta 106
||||| || ||| |||||||||||||||||||||
Sbjct: 83 ttgagtcacttaatttgggacggagggagtacta 116
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 74 tgagacagttattttgggacggagggagta 103
||||||| ||||||||| ||||||||||||
Sbjct: 101 tgagacacttattttggaacggagggagta 130
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Minus
Query: 22 ataataagtgtctcaactttgtagtaact--ctagtacaaagttg 64
|||||||||| |||||||||||| ||||| |||||||||||||
Sbjct: 77 ataataagtggctcaactttgtactaactagttagtacaaagttg 33
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ttttgggacggagggagtacta 106
||||||||||||||||||||||
Sbjct: 82 ttttgggacggagggagtacta 103
>RF00906;MIR1122;AAAA02031697.1/13340-13228 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 89 tattttgggacggagggagtac 110
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa Indica
Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 111 ttattttgggacggagggagta 132
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 97 ttattttgggacggagggagta 118
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02013497.1/8427-8281 39946:Oryza sativa Indica
Group
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ttttgggacggagggagtacta 106
||||||||||||||||||||||
Sbjct: 125 ttttgggacggagggagtacta 146
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AACV01025370.1/11561-11672 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 85 ttttgggacggagggagtacta 106
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacta 2
>RF00906;MIR1122;AAAA02024817.1/15052-15155 39946:Oryza sativa
Indica Group
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 80 agttattttgggacggagggagtact 105
||||||||||||||||| ||||||||
Sbjct: 77 agttattttgggacggaaggagtact 102
>RF00906;MIR1122;AACV01013045.1/9312-9408 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 80 agttattttgggacggagggagtact 105
|||| |||||||||||||||||||||
Sbjct: 70 agtttttttgggacggagggagtact 95
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 98 tattttgggacggagggagtac 119
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 98 tattttgggacggagggagtac 119
>RF00906;MIR1122;AAAA02006215.1/494-605 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtac 109
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtac 154
>RF00906;MIR1122;AP006526.2/71284-71151 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 80 agttattttgggacggagggagtact 105
||||||||||||| ||||||||||||
Sbjct: 107 agttattttgggatggagggagtact 132
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 78 ttattttgggacggagggagta 99
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AP005586.3/39119-39252 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 110 tattttgggacggagggagtac 131
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtac 109
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 92 ttattttgggacggagggagta 113
>RF00906;MIR1122;AL662977.3/22853-22707 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 85 ttttgggacggagggagtacta 106
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacta 2
>RF00906;MIR1122;AACV01024204.1/3332-3459 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 85 ttttgggacggagggagtacta 106
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacta 2
>RF00906;MIR1122;AL772423.4/33732-33621 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 85 ttttgggacggagggagtacta 106
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacta 2
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 132 tattttgggacggagggagtac 153
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AACV01017892.1/4248-4093 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 80 agttattttgggacggagggagtact 105
|||| |||||||||||||||||||||
Sbjct: 129 agtttttttgggacggagggagtact 154
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 131 tattttgggacggagggagtac 152
>RF00906;MIR1122;AP008210.1/24813715-24813809 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 71 tattttgggacggagggagtac 92
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtac 109
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 104 ttattttgggacggagggagta 125
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 82 ttattttgggacggagggagta 103
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tattttgggacggagggagtac 104
||||||||||||||||||||||
Sbjct: 116 tattttgggacggagggagtac 137