miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
          Length = 93

 Score =  101 bits (51), Expect = 2e-21
 Identities = 74/81 (91%), Gaps = 3/81 (3%)
 Strand = Plus / Plus

                                                                      
Query: 19 tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
          |||| ||||||||||||||||||| ||||||||   ||||||||||||||||||||||| 
Sbjct: 5  tactacctctgtaaagaaatataagagcgttta---gatcactgaagtagtgatctaaac 61

                               
Query: 79 gttcttatatttctttacaga 99
          | |||||||||||||||||||
Sbjct: 62 gctcttatatttctttacaga 82



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 66/77 (85%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                      
Query: 23 ccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaatgttc 82
          |||||||||||||||||||| ||||||||   |||||||     ||||||||||| | ||
Sbjct: 85 ccctctgtaaagaaatataagagcgttta---gatcactacttcagtgatctaaacgctc 29

                           
Query: 83 ttatatttctttacaga 99
          |||||||||||||||||
Sbjct: 28 ttatatttctttacaga 12




>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
           wheat)
          Length = 93

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 78/89 (87%), Gaps = 3/89 (3%)
 Strand = Plus / Plus

                                                                       
Query: 18  gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
           |||||||||| |||||||||||||| ||||||||   || |||| ||||||| |||||||
Sbjct: 4   gtactccctcggtaaagaaatataagagcgttta---gagcactaaagtagttatctaaa 60

                                        
Query: 78  tgttcttatatttctttacagaaggagta 106
           || ||||||||||||||| ||| ||||||
Sbjct: 61  tgctcttatatttctttatagagggagta 89



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 73/89 (82%), Gaps = 3/89 (3%)
 Strand = Plus / Minus

                                                                       
Query: 18  gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
           ||||||||||| ||||||||||||| ||| |   |||||| |||    ||||| ||||||
Sbjct: 90  gtactccctctataaagaaatataagagcat---ttagataactactttagtgctctaaa 34

                                        
Query: 78  tgttcttatatttctttacagaaggagta 106
            | |||||||||||||||| || ||||||
Sbjct: 33  cgctcttatatttctttaccgagggagta 5




>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
          Length = 93

 Score = 79.8 bits (40), Expect = 8e-15
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                   
Query: 52  ttagatcactgaagtagtgatctaaatgttcttatatttctttacagaaggagtaa 107
           |||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 35  ttagatcactaaagtagttatctaaatgatcttatatttctttacagagggagtaa 90



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 19 tactccctctgtaaagaaatataa 42
          ||||||||||||||||||||||||
Sbjct: 89 tactccctctgtaaagaaatataa 66




>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
           wheat)
          Length = 93

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 76/88 (86%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 19  tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
           ||||||||| |||||||||||||| ||| ||||   ||||||| |||||||||||| |||
Sbjct: 89  tactccctccgtaaagaaatataagagcattta---gatcactaaagtagtgatctgaat 33

                                       
Query: 79  gttcttatatttctttacagaaggagta 106
           | |||||||||  |||||||| ||||||
Sbjct: 32  gctcttatattagtttacagagggagta 5



 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 66  tagtgatctaaatgttcttatatttctttacagaaggagtaa 107
           |||||||||||||| |||||||||||||||| || |||||||
Sbjct: 49  tagtgatctaaatgctcttatatttctttacggagggagtaa 90




>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
          Length = 93

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 76/89 (85%), Gaps = 3/89 (3%)
 Strand = Plus / Plus

                                                                       
Query: 18  gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
           ||||||| ||||||||||||||||| ||||| ||   ||||||| ||||||| |||||||
Sbjct: 4   gtactccttctgtaaagaaatataagagcgtcta---gatcactaaagtagttatctaaa 60

                                        
Query: 78  tgttcttatatttctttacagaaggagta 106
              |||||||||||||||| || ||||||
Sbjct: 61  cactcttatatttctttacggagggagta 89



 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 19  tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
           ||||||||| |||||||||||||| || |||||   ||| |||    |||||||||| | 
Sbjct: 89  tactccctccgtaaagaaatataagagtgttta---gataactactttagtgatctagac 33

                                       
Query: 79  gttcttatatttctttacagaaggagta 106
           | ||||||||||||||||||||||||||
Sbjct: 32  gctcttatatttctttacagaaggagta 5




>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
          Length = 87

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 75/88 (85%), Gaps = 9/88 (10%)
 Strand = Plus / Plus

                                                                       
Query: 19  tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
           |||||||||||||||||||||||| |||||   ||||||||      |||||||||||| 
Sbjct: 5   tactccctctgtaaagaaatataagagcgt---ttagatca------tagtgatctaaac 55

                                       
Query: 79  gttcttatatttctttacagaaggagta 106
           | ||||||||||||||||||| ||||||
Sbjct: 56  gctcttatatttctttacagagggagta 83



 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 75/89 (84%), Gaps = 9/89 (10%)
 Strand = Plus / Minus

                                                                       
Query: 18  gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
           ||||||||||||||||||||||||| |||||   ||||||||||       |||||||||
Sbjct: 84  gtactccctctgtaaagaaatataagagcgt---ttagatcact------atgatctaaa 34

                                        
Query: 78  tgttcttatatttctttacagaaggagta 106
            | ||||||||||||||||||| ||||||
Sbjct: 33  cgctcttatatttctttacagagggagta 5




>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
          Length = 91

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 52  ttagatcactgaagtagtgatctaaatgttcttatatttctttacagaaggagta 106
           |||||||||| |||||||||||||||   ||||||||||||||||||| ||||||
Sbjct: 33  ttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagta 87



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                             
Query: 17 ggtactccctctgtaaagaaatataaaagcgttta 51
          |||||||||||||||||||||||||| || |||||
Sbjct: 89 ggtactccctctgtaaagaaatataagagtgttta 55




>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
           (bread wheat)
          Length = 93

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 78/92 (84%), Gaps = 3/92 (3%)
 Strand = Plus / Plus

                                                                       
Query: 16  aggtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatcta 75
           |||||||||||| |||||  ||||||||||||||||   ||  ||| || ||||||||||
Sbjct: 2   aggtactccctccgtaaactaatataaaagcgttta---gaatactaaaatagtgatcta 58

                                           
Query: 76  aatgttcttatatttctttacagaaggagtaa 107
           || |||||||||||  |||||||| |||||||
Sbjct: 59  aacgttcttatattagtttacagagggagtaa 90




>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
          Length = 92

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 62/71 (87%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                      
Query: 19 tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
          |||||||||||||||  ||||||| ||||||||   ||||||| ||||||||||||||| 
Sbjct: 5  tactccctctgtaaactaatataagagcgttta---gatcactaaagtagtgatctaaac 61

                     
Query: 79 gttcttatatt 89
          | |||||||||
Sbjct: 62 gctcttatatt 72




>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
          Length = 93

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 68/79 (86%), Gaps = 3/79 (3%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
          |||||||||||||||| ||||||||  |||||||   |||| || || ||||||||||||
Sbjct: 4  gtactccctctgtaaacaaatataagggcgttta---gatctctaaaatagtgatctaaa 60

                             
Query: 78 tgttcttatatttctttac 96
           | ||||||||||||||||
Sbjct: 61 cgctcttatatttctttac 79



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 70/85 (82%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                       
Query: 22  tccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaatgtt 81
           |||||| |||||||||||||| |||||   ||||||||||    ||| |||||||| |  
Sbjct: 86  tccctcagtaaagaaatataagagcgt---ttagatcactattttagagatctaaacgcc 30

                                    
Query: 82  cttatatttctttacagaaggagta 106
           ||||||||| |||||||| ||||||
Sbjct: 29  cttatatttgtttacagagggagta 5




>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
          Length = 93

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 52  ttagatcactgaagtagtgatctaaatgttcttatatttctttacagaaggagta 106
           |||||||||| ||||||||||||||| | |||||||||  |||||||| ||||||
Sbjct: 35  ttagatcactaaagtagtgatctaaaaggtcttatattagtttacagagggagta 89




>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
          Length = 93

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                         
Query: 53 tagatcactgaagtagtgatctaaatgttcttatatttctttacaga 99
          ||||||||| ||||||||||||||| | |||||||||| ||||||||
Sbjct: 58 tagatcactaaagtagtgatctaaacgctcttatatttgtttacaga 12




>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 82

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 66  tagtgatctaaatgttcttatatttctttacagaaggag 104
           |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 38  tagtgatctaaatgatcttatatttctttacagagggag 76



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 19 tactccctctgtaaagaaatataaaagcgtttat 52
          |||||||||||||||||||||||| | |||||||
Sbjct: 5  tactccctctgtaaagaaatataagatcgtttat 38



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 81  tcttatatttctttacagaaggagta 106
           ||||||||||||||||||| ||||||
Sbjct: 30  tcttatatttctttacagagggagta 5



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 21 ctccctctgtaaagaaatataa 42
          ||||||||||||||||||||||
Sbjct: 76 ctccctctgtaaagaaatataa 55




>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
           (bread wheat)
          Length = 93

 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 19  tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
           |||||||||||||||  ||||||| |||| |||   ||||||| ||||||||||||||  
Sbjct: 89  tactccctctgtaaactaatataagagcgctta---gatcactaaagtagtgatctaagc 33

                                       
Query: 79  gttcttatatttctttacagaaggagta 106
           | |||||||||  |||||||| ||||||
Sbjct: 32  gctcttatattagtttacagagggagta 5




>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum (bread
           wheat)
          Length = 92

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 54  agatcactgaagtagtgatctaaatgttcttatatttctttacagaaggagta 106
           |||||||| ||||||||| ||||| | |||||||||||||||| || ||||||
Sbjct: 57  agatcactcaagtagtgacctaaacgctcttatatttctttacggagggagta 5



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 19 tactccctctgtaaagaaatataaaagcgttta 51
          ||||||||| |||||||||||||| ||||||||
Sbjct: 5  tactccctccgtaaagaaatataagagcgttta 37




>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
          subsp. dicoccoides
          Length = 96

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                           
Query: 64 agtagtgatctaaatgttcttatatttctttac 96
          |||||||||||||| ||||||||||||||||||
Sbjct: 47 agtagtgatctaaacgttcttatatttctttac 15




>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
          (bread wheat)
          Length = 99

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 69/82 (84%), Gaps = 9/82 (10%)
 Strand = Plus / Plus

                                                                      
Query: 19 tactccctctgtaaagaaatataaaagcgtttattagatcactgaa------gtagtgat 72
          |||||||||||||||||||||||| | ||||||   ||||||| ||      ||||||||
Sbjct: 5  tactccctctgtaaagaaatataagatcgttta---gatcactaaaatagtagtagtgat 61

                                
Query: 73 ctaaatgttcttatatttcttt 94
          ||||||| ||||||||||||||
Sbjct: 62 ctaaatgatcttatatttcttt 83



 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 66  tagtgatctaaatgttcttatatttctttacagaaggagta 106
           |||||||||||| | ||||||||||||||||||| ||||||
Sbjct: 45  tagtgatctaaacgatcttatatttctttacagagggagta 5




>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
          Length = 92

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 62/71 (87%), Gaps = 4/71 (5%)
 Strand = Plus / Plus

                                                                       
Query: 36  aatataaaagcgtttattagatcactgaagtagtgatctaaatgttcttatatttcttta 95
           ||||||||||||||||   ||||| | ||||||||||||||||| |||||||||  ||||
Sbjct: 22  aatataaaagcgttta---gatcatt-aagtagtgatctaaatgctcttatattagttta 77

                      
Query: 96  cagaaggagta 106
           |||| ||||||
Sbjct: 78  cagagggagta 88




>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
          Length = 91

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 71/83 (85%), Gaps = 4/83 (4%)
 Strand = Plus / Plus

                                                                       
Query: 24  cctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaatgttct 83
           ||||||||||  ||||||||||| ||||   ||||||| ||||||||||||||||| |||
Sbjct: 9   cctctgtaaactaatataaaagcattta---gatcact-aagtagtgatctaaatgctct 64

                                  
Query: 84  tatatttctttacagaaggagta 106
           ||||||  ||||| || ||||||
Sbjct: 65  tatattagtttacggagggagta 87




>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 69/82 (84%), Gaps = 3/82 (3%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
          |||||||||| |||||  ||||||| ||||||||   | ||||| || ||||||||||||
Sbjct: 4  gtactccctccgtaaactaatataagagcgttta---ggtcactaaaatagtgatctaaa 60

                                
Query: 78 tgttcttatatttctttacaga 99
          || |||||||||  ||||||||
Sbjct: 61 tgctcttatattagtttacaga 82




>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
           wheat)
          Length = 93

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 66  tagtgatctaaatgttcttatatttctttacagaaggagtaa 107
           |||||||||||||| |||||||||  |||||||| |||||||
Sbjct: 45  tagtgatctaaatgctcttatattagtttacagagggagtaa 4



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 75/91 (82%), Gaps = 3/91 (3%)
 Strand = Plus / Plus

                                                                       
Query: 19  tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
           |||||||||||||||  ||||||| ||| |   |||||||||| || |||| ||||||| 
Sbjct: 5   tactccctctgtaaactaatataagagcat---ttagatcactaaaatagtaatctaaac 61

                                          
Query: 79  gttcttatatttctttacagaaggagtaact 109
           | |||||||||  ||||| || |||||||||
Sbjct: 62  gctcttatattagtttacggagggagtaact 92




>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
          Length = 100

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 52/60 (86%), Gaps = 3/60 (5%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
          ||||||||||||||||  ||||||| ||| ||||   ||||||| |||||||||||||||
Sbjct: 4  gtactccctctgtaaactaatataagagctttta---gatcactaaagtagtgatctaaa 60




>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
          Length = 93

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 67/80 (83%), Gaps = 3/80 (3%)
 Strand = Plus / Plus

                                                                      
Query: 19 tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
          |||||||||||||||  ||||||| |||||   |||||| ||| |||||||| |||||||
Sbjct: 5  tactccctctgtaaactaatataagagcgt---ttagattactaaagtagtgttctaaat 61

                              
Query: 79 gttcttatatttctttacag 98
          | | |||||||  |||||||
Sbjct: 62 gcttttatattagtttacag 81




>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 93

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 52 ttagatcactgaagtagtgatctaaatgttcttatatt 89
          |||||| |||||||||||| |||||||| |||||||||
Sbjct: 35 ttagattactgaagtagtgttctaaatgctcttatatt 72




>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
          Length = 93

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 66  tagtgatctaaatgttcttatatttctttacagaaggagta 106
           |||||||||||||||| |||||||  |||||||| ||||||
Sbjct: 49  tagtgatctaaatgtttttatattagtttacagagggagta 89



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 74/90 (82%), Gaps = 3/90 (3%)
 Strand = Plus / Minus

                                                                       
Query: 18  gtactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaa 77
           ||||||||||||||||  ||||||||| | |   |||||||||| ||||||| |||||||
Sbjct: 90  gtactccctctgtaaactaatataaaaacat---ttagatcactaaagtagtaatctaaa 34

                                         
Query: 78  tgttcttatatttctttacagaaggagtaa 107
              |||||||||  ||||| || |||||||
Sbjct: 33  cactcttatattagtttacggagggagtaa 4




>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
          Length = 93

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 60/71 (84%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                      
Query: 19 tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
          |||||||||||||||  ||||||| |||||   || ||||||| || |||||||||||| 
Sbjct: 5  tactccctctgtaaattaatataagagcgt---ttggatcactaaaatagtgatctaaac 61

                     
Query: 79 gttcttatatt 89
          | |||||||||
Sbjct: 62 gctcttatatt 72




>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
           dicoccoides
          Length = 95

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 64  agtagtgatctaaatgttcttatatttctttacagaaggagta 106
           |||||||||||||| | |||||||||  |||||||| ||||||
Sbjct: 49  agtagtgatctaaaaggtcttatattagtttacagagggagta 91




>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
          Length = 100

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                            
Query: 66 tagtgatctaaatgttcttatatttctttacaga 99
          |||||||||||||| |||||||||  ||||||||
Sbjct: 45 tagtgatctaaatgctcttatattagtttacaga 12




>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
           subsp. dicoccoides
          Length = 93

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 72/88 (81%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 19  tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
           |||||||||||||||  ||||||||||   || ||| || ||| || |||||||||||| 
Sbjct: 89  tactccctctgtaaactaatataaaag---tttttaaattactaaactagtgatctaaac 33

                                       
Query: 79  gttcttatatttctttacagaaggagta 106
             |||||||||  |||||||| ||||||
Sbjct: 32  actcttatattagtttacagagggagta 5




>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 93

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 18 gtactccctctgtaaagaaatataaaagcgttta 51
          ||||||||||||||||  ||||||||||| ||||
Sbjct: 4  gtactccctctgtaaactaatataaaagcattta 37




>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 138

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 18 gtactccctctgtaaagaaatataaaagcgttta 51
          ||||||||||||||||  ||||||| ||||||||
Sbjct: 4  gtactccctctgtaaactaatataagagcgttta 37




>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
          Length = 91

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 18 gtactccctctgtaaagaaatataaaagcgttta 51
          ||||||||||||||||  |||||||||| |||||
Sbjct: 4  gtactccctctgtaaactaatataaaagtgttta 37




>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
          Length = 93

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 18 gtactccctctgtaaagaaatataaaagcgttta 51
          ||||||||||||||||  ||||||| ||||||||
Sbjct: 4  gtactccctctgtaaactaatataagagcgttta 37



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 72/88 (81%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 19  tactccctctgtaaagaaatataaaagcgtttattagatcactgaagtagtgatctaaat 78
           ||||||||| |||||  ||||||| ||||||||   ||  ||| || |||||||||||| 
Sbjct: 89  tactccctccgtaaactaatataagagcgttta---gaatactaaaatagtgatctaaac 33

                                       
Query: 79  gttcttatatttctttacagaaggagta 106
           | |||||||||  |||||||| ||||||
Sbjct: 32  gctcttatattagtttacagagggagta 5