miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00681;mir-198;AB039661.1/2234-2295 9541:Macaca fascicularis
          (crab-eating macaque)
          Length = 62

 Score =  123 bits (62), Expect = 3e-28
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcattggtccagaggggaaataggttcctgtgatttttccttcttctctgtagaataaat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tcattggtccagaggggaaataggttcctgtgatttttccttcttctctgtagaataaat 60

            
Query: 61 ga 62
          ||
Sbjct: 61 ga 62




>RF00681;mir-198;AY866280.1/427-488 9519:Lagothrix lagotricha
          (common woolly monkey)
          Length = 62

 Score = 67.9 bits (34), Expect = 1e-11
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                    
Query: 5  tggtccagaggggaaataggttcctgtgatttttccttcttctctgtagaataaatga 62
          ||||||||| ||||  ||||| | ||||||||||||||||| ||||||||||||||||
Sbjct: 5  tggtccagaagggagctaggtacttgtgatttttccttcttttctgtagaataaatga 62