miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00727;bantam;ABLF01005214.1/5435-5342 7029:Acyrthosiphon pisum
(pea aphid)
Length = 94
Score = 141 bits (71), Expect = 1e-33
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 cgaagctggttttcactttgatctgtcagatttatcattgttcattctgagatcattgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 cgaagctggttttcactttgatctgtcagatttatcattgttcattctgagatcattgtg 69
Query: 61 aaagctaattt 71
|||||||||||
Sbjct: 70 aaagctaattt 80
>RF00727;bantam;AADK01008828.1/6468-6379 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 attctgagatcattgtgaaagctaattt 71
||||||||||||||||||||||||||||
Sbjct: 49 attctgagatcattgtgaaagctaattt 76
>RF00727;bantam;AAZO01005717.1/66950-67042 121224:Pediculus
humanus corporis (human body louse)
Length = 93
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 attctgagatcattgtgaaagctaattt 71
||||||||||||||||||||||| ||||
Sbjct: 51 attctgagatcattgtgaaagctgattt 78
>RF00727;bantam;AAZX01004974.1/17134-17222 7425:Nasonia
vitripennis (jewel wasp)
Length = 89
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 attctgagatcattgtgaaagctaattt 71
||||||||||||||||||||||| ||||
Sbjct: 48 attctgagatcattgtgaaagctgattt 75
>RF00727;bantam;AADG05005002.1/2155-2243 7460:Apis mellifera
(honey bee)
Length = 89
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 attctgagatcattgtgaaagctaattt 71
||||||||||||||||||||||| ||||
Sbjct: 48 attctgagatcattgtgaaagctgattt 75
>RF00727;bantam;AAJJ01000881.1/39195-39283 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 attctgagatcattgtgaaagctaattt 71
||||||||||||||||||||||| ||||
Sbjct: 48 attctgagatcattgtgaaagctgattt 75
>RF00728;mir-81;AAQA01000482.1/18100-18000 6279:Brugia malayi
Length = 101
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 tctgagatcattgtgaaagcta 67
||||||||||||||||||||||
Sbjct: 61 tctgagatcattgtgaaagcta 82
>RF00727;bantam;ABJB010305858.1/1270-1184 6945:Ixodes scapularis
(black-legged tick)
Length = 87
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 46 tctgagatcattgtgaaagctaattt 71
||||||||||||||||||||| ||||
Sbjct: 51 tctgagatcattgtgaaagctgattt 76
