miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;ABLF01028761.1/10726-10634 7029:Acyrthosiphon
pisum (pea aphid)
Length = 93
Score = 131 bits (66), Expect = 1e-30
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggtacatatttacacatcacccgtagttcttctgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 aatggcactgaaagaattcacggggtacatatttacacatcacccgtagttcttctgtgc 75
Query: 61 cgtatt 66
||||||
Sbjct: 76 cgtatt 81
>RF00706;mir-263;AAZO01000403.1/2645-2725 121224:Pediculus humanus
corporis (human body louse)
Length = 81
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacgg 23
|||||||||||||||||||||||
Sbjct: 13 aatggcactgaaagaattcacgg 35
>RF00706;mir-263;AC011065.6/94391-94302 7227:Drosophila
melanogaster (fruit fly)
Length = 90
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggta 27
|||||||||| ||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggta 42
>RF00706;mir-263;AADE01000074.1/40884-40796 46245:Drosophila
pseudoobscura pseudoobscura
Length = 89
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggt 41
>RF00706;mir-263;AAPU01010625.1/4665-4753 7230:Drosophila
mojavensis
Length = 89
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggt 41
>RF00706;mir-263;AAJJ01000157.1/103377-103289 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggt 41
>RF00706;mir-263;ABJB010285488.1/4151-4241 6945:Ixodes scapularis
(black-legged tick)
Length = 91
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggt 41
>RF00706;mir-263;AAZX01007729.1/30973-30881 7425:Nasonia
vitripennis (jewel wasp)
Length = 93
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacgggg 25
|||||||||| ||||||||||||||
Sbjct: 17 aatggcactggaagaattcacgggg 41
>RF00706;mir-263;AADG05003940.1/44836-44746 7460:Apis mellifera
(honey bee)
Length = 91
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacgggg 25
|||||||||| ||||||||||||||
Sbjct: 16 aatggcactggaagaattcacgggg 40