miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00757;mir-275;ABLF01003185.1/42778-42870 7029:Acyrthosiphon
pisum (pea aphid)
Length = 93
Score = 123 bits (62), Expect = 3e-28
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 ggctgctacaggcactcttagactctttaatgttgacgaagtcaggtacctgaagtagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ggctgctacaggcactcttagactctttaatgttgacgaagtcaggtacctgaagtagcg 77
Query: 61 cg 62
||
Sbjct: 78 cg 79
>RF00757;mir-275;AAJJ01000649.1/41251-41341 7070:Tribolium
castaneum (red flour beetle)
Length = 91
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 aagtcaggtacctgaagtagcgcg 62
||||||||||||||||||||||||
Sbjct: 53 aagtcaggtacctgaagtagcgcg 76
>RF00757;mir-275;ABJB010317264.1/3436-3346 6945:Ixodes scapularis
(black-legged tick)
Length = 91
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 aagtcaggtacctgaagtagcgcg 62
||||||||||||||||||||||||
Sbjct: 53 aagtcaggtacctgaagtagcgcg 76
>RF00757;mir-275;BABH01005296.1/11764-11850 7091:Bombyx mori
(domestic silkworm)
Length = 87
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 51 agtcaggtacctgaagtagcgcg 73
>RF00757;mir-275;AAZX01002044.1/14734-14647 7425:Nasonia
vitripennis (jewel wasp)
Length = 88
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 53 agtcaggtacctgaagtagcgcg 75
>RF00757;mir-275;AADG05001619.1/13993-14083 7460:Apis mellifera
(honey bee)
Length = 91
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 57 agtcaggtacctgaagtagcgcg 79
>RF00757;mir-275;AAWU01017837.1/19596-19687 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 92
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 56 agtcaggtacctgaagtagcgcg 78
>RF00757;mir-275;AAGE02001651.1/96625-96717 7159:Aedes aegypti
(yellow fever mosquito)
Length = 93
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 56 agtcaggtacctgaagtagcgcg 78
>RF00757;mir-275;ABKQ02010004.1/3068-3162 377270:Anopheles gambiae
S
Length = 95
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 59 agtcaggtacctgaagtagcgcg 81
>RF00757;mir-275;AAKO01000986.1/85073-85163 7238:Drosophila
sechellia
Length = 91
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 55 agtcaggtacctgaagtagcgcg 77
>RF00757;mir-275;AAQB01006829.1/458431-458336 7260:Drosophila
willistoni
Length = 96
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 60 agtcaggtacctgaagtagcgcg 82
>RF00757;mir-275;AAFS01000035.1/187021-187111 46245:Drosophila
pseudoobscura pseudoobscura
Length = 91
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 55 agtcaggtacctgaagtagcgcg 77
>RF00757;mir-275;AAPP01015737.1/35785-35873 7217:Drosophila
ananassae
Length = 89
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 53 agtcaggtacctgaagtagcgcg 75
>RF00757;mir-275;AANI01016257.1/59564-59470 7244:Drosophila
virilis
Length = 95
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 agtcaggtacctgaagtagcgcg 62
|||||||||||||||||||||||
Sbjct: 58 agtcaggtacctgaagtagcgcg 80
