miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00027;let-7;ABKP02019321.1/4252-4323 377271:Anopheles gambiae M
          Length = 72

 Score =  143 bits (72), Expect = 4e-34
 Identities = 72/72 (100%)
 Strand = Plus / Plus

                                                                      
Query: 9  ccgtgttgaggtagttggttgtatagtaccgtggttccaatactcgactatacaatccgc 68
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccgtgttgaggtagttggttgtatagtaccgtggttccaatactcgactatacaatccgc 60

                      
Query: 69 taacttacctcg 80
          ||||||||||||
Sbjct: 61 taacttacctcg 72




>RF00027;let-7;AAWU01000327.1/4832-4903 7176:Culex
          quinquefasciatus (southern house mosquito)
          Length = 72

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 13 gttgaggtagttggttgtatagta 36
          ||||||||||||||||||||||||
Sbjct: 5  gttgaggtagttggttgtatagta 28




>RF00027;let-7;AAGE02002929.1/321613-321685 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 73

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 13 gttgaggtagttggttgtatagta 36
          ||||||||||||||||||||||||
Sbjct: 5  gttgaggtagttggttgtatagta 28




>RF00027;let-7;ABLF01019923.1/2377-2307 7029:Acyrthosiphon pisum
          (pea aphid)
          Length = 71

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 tgaggtagttggttgtatagta 36
          ||||||||||||||||||||||
Sbjct: 7  tgaggtagttggttgtatagta 28




>RF00027;let-7;BABH01009736.1/23777-23700 7091:Bombyx mori
          (domestic silkworm)
          Length = 78

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 12 tgttgaggtagttggttgtatagtac 37
          |||||||||||| |||||||||||||
Sbjct: 4  tgttgaggtagtaggttgtatagtac 29