miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00729;mir-278;ABKP02019144.1/2398-2299 377271:Anopheles gambiae
M
Length = 100
Score = 165 bits (83), Expect = 1e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 ggtacggtacggacggacgatagtcttcaacgaccgttccgtttgacacgaggtcggtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ggtacggtacggacggacgatagtcttcaacgaccgttccgtttgacacgaggtcggtgg 65
Query: 61 gactttcgtccgtttgtaaggcc 83
|||||||||||||||||||||||
Sbjct: 66 gactttcgtccgtttgtaaggcc 88
>RF00729;mir-278;AAWU01001740.1/43930-44034 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 105
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 52 ggtcggtgggactttcgtccgtttgtaa 79
||||||||||||||||||||||||||||
Sbjct: 62 ggtcggtgggactttcgtccgtttgtaa 89
>RF00729;mir-278;AAGE02001172.1/33036-33136 7159:Aedes aegypti
(yellow fever mosquito)
Length = 101
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 52 ggtcggtgggactttcgtccgtttgtaa 79
||||||||||||||||||||||||||||
Sbjct: 58 ggtcggtgggactttcgtccgtttgtaa 85
>RF00729;mir-278;AAPP01018781.1/36806-36709 7217:Drosophila
ananassae
Length = 98
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 52 ggtcggtgggactttcgtccgtttgtaa 79
||||||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttgtaa 82
>RF00729;mir-278;AANI01014820.1/6361-6262 7244:Drosophila virilis
Length = 100
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 52 ggtcggtgggactttcgtccgtttgtaa 79
||||||||||||||||||||||||||||
Sbjct: 57 ggtcggtgggactttcgtccgtttgtaa 84
>RF00729;mir-278;AADG05005760.1/28066-27969 7460:Apis mellifera
(honey bee)
Length = 98
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aggtcggtgggactttcgtccgtttg 76
||||||||||||||||||||||||||
Sbjct: 54 aggtcggtgggactttcgtccgtttg 79
>RF00729;mir-278;AAZO01005350.1/16349-16259 121224:Pediculus
humanus corporis (human body louse)
Length = 91
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tcggtgggactttcgtccgttt 75
||||||||||||||||||||||
Sbjct: 52 tcggtgggactttcgtccgttt 73
