miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00747;mir-283;ABKQ02004749.1/31643-31736 377270:Anopheles
gambiae S
Length = 94
Score = 182 bits (92), Expect = 5e-46
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 ttcgaccgaaaggtaaatatcagctggtaattctaggctatcaatccatcgtgcatcccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ttcgaccgaaaggtaaatatcagctggtaattctaggctatcaatccatcgtgcatcccg 62
Query: 61 ggatttcagctgatatccacttttccgtcgag 92
||||||||||||||||||||||||||||||||
Sbjct: 63 ggatttcagctgatatccacttttccgtcgag 94
>RF00747;mir-283;AAGE02004323.1/32429-32333 7159:Aedes aegypti
(yellow fever mosquito)
Length = 97
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 ttcgaccgaaaggtaaatatcagctggtaattctaggct 39
|||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 3 ttcgactgaaaggtcaatatcagctggtaattctgggct 41
>RF00747;mir-283;AAQB01006319.1/8842-8742 7260:Drosophila
willistoni
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 aaaggtaaatatcagctggtaattct 34
||||||||||||||||||||||||||
Sbjct: 13 aaaggtaaatatcagctggtaattct 38
>RF00747;mir-283;AAPU01008564.1/40966-41063 7230:Drosophila
mojavensis
Length = 98
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 aaaggtaaatatcagctggtaattct 34
||||||||||||||||||||||||||
Sbjct: 13 aaaggtaaatatcagctggtaattct 38
>RF00747;mir-283;AAWU01005348.1/2399-2495 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 97
Score = 50.1 bits (25), Expect = 5e-06
Identities = 68/80 (85%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 8 gaaaggtaaatatcagctggtaattctaggctatc--aatccatcgt-gcatcccgggat 64
||||||| ||||||||||||||||||| |||| || || || | || || |||||||||
Sbjct: 10 gaaaggtcaatatcagctggtaattctgggctttccaaacccgttgtcgcttcccgggat 69
Query: 65 ttcagctgatatccactttt 84
| || |||||||||||||||
Sbjct: 70 tccaactgatatccactttt 89
>RF00747;mir-283;BAAB01105947.1/481-397 7091:Bombyx mori (domestic
silkworm)
Length = 85
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 taaatatcagctggtaattctaggct 39
||||||||||||||||||||| ||||
Sbjct: 16 taaatatcagctggtaattctgggct 41
