miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00789;mir-286;ABKQ02013446.1/12551-12632 377270:Anopheles
gambiae S
Length = 82
Score = 163 bits (82), Expect = 5e-40
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 9 ttggggcgattgtcggactagtcgctgtcgcagtcattcggtttcaccttagtgactaga 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggggcgattgtcggactagtcgctgtcgcagtcattcggtttcaccttagtgactaga 60
Query: 69 ccgaacactcgcgtcctaaacg 90
||||||||||||||||||||||
Sbjct: 61 ccgaacactcgcgtcctaaacg 82
>RF00789;mir-286;AAGE02018252.1/93413-93512 7159:Aedes aegypti
(yellow fever mosquito)
Length = 100
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 58 tagtgactagaccgaacactcgcgtcctaaa 88
|||||||||||||||||||||||||||||||
Sbjct: 60 tagtgactagaccgaacactcgcgtcctaaa 90
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 atttggggcgattgtcggactagtcgctg 35
|||||||||||||||||||||||||||||
Sbjct: 7 atttggggcgattgtcggactagtcgctg 35
>RF00789;mir-286;AAWU01011011.1/917-844 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 74
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 agtgactagaccgaacactcgcgtcctaaa 88
||||||||||||||||||||||||||||||
Sbjct: 43 agtgactagaccgaacactcgcgtcctaaa 72
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 ttggggcgattgtcggactagtcgct 34
||||||||||||||||||||||||||
Sbjct: 1 ttggggcgattgtcggactagtcgct 26
>RF00789;mir-286;AAGE02008291.1/17656-17755 7159:Aedes aegypti
(yellow fever mosquito)
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tagtgactagaccgaacactcg 79
||||||||||||||||||||||
Sbjct: 63 tagtgactagaccgaacactcg 84
>RF00789;mir-286;ABKP02021621.1/18938-19014 377271:Anopheles
gambiae M
Length = 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 agtgactagaccgaacactcgcgtcctaaa 88
||||||||||||||||||||| |||||||
Sbjct: 46 agtgactagaccgaacactcgtatcctaaa 75
