miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00743;mir-308;ABKQ02024255.1/111320-111257 377270:Anopheles
gambiae S
Length = 64
Score = 127 bits (64), Expect = 3e-29
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 17 ttcgcagtatatccctgtgagtttgctacttttcaatggtcaaatcacaggagtatactg 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcgcagtatatccctgtgagtttgctacttttcaatggtcaaatcacaggagtatactg 60
Query: 77 tgag 80
||||
Sbjct: 61 tgag 64
>RF00743;mir-308;AAWU01008421.1/27722-27788 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 67
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 tcaaatcacaggagtatactgtgag 80
|||||||||||||||||||||||||
Sbjct: 43 tcaaatcacaggagtatactgtgag 67
>RF00743;mir-308;AAGE02006324.1/6463-6527 7159:Aedes aegypti
(yellow fever mosquito)
Length = 65
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 tcaaatcacaggagtatactgtgag 80
|||||||||||||||||||||||||
Sbjct: 41 tcaaatcacaggagtatactgtgag 65
