miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00720;mir-317;AAAB01008859.1/3281503-3281595 180454:Anopheles
gambiae str. PEST
Length = 93
Score = 178 bits (90), Expect = 8e-45
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 cgtctctgccactgggatactccttgtgctcgctgtgcatatcgattcaaactagtgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgtctctgccactgggatactccttgtgctcgctgtgcatatcgattcaaactagtgaac 61
Query: 61 acatctggtggtatctcagtggccgggatg 90
||||||||||||||||||||||||||||||
Sbjct: 62 acatctggtggtatctcagtggccgggatg 91
>RF00720;mir-317;AAGE02012640.1/88438-88525 7159:Aedes aegypti
(yellow fever mosquito)
Length = 88
Score = 63.9 bits (32), Expect = 3e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 aaactagtgaacacatctggtggtatctcagtggcc 84
||||||||||||||| ||||||||||||||||||||
Sbjct: 45 aaactagtgaacacagctggtggtatctcagtggcc 80
>RF00720;mir-317;ABLF01040770.1/5816-5924 7029:Acyrthosiphon pisum
(pea aphid)
Length = 109
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 agtgaacacatctggtggtatctcagt 80
|||||||||| ||||||||||||||||
Sbjct: 71 agtgaacacagctggtggtatctcagt 97
>RF00720;mir-317;AADK01000441.1/12625-12537 7091:Bombyx mori
(domestic silkworm)
Length = 89
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 agtgaacacatctggtggtatctcagt 80
|||||||||| ||||||||||||||||
Sbjct: 51 agtgaacacagctggtggtatctcagt 77
>RF00720;mir-317;AAJJ01000475.1/38254-38168 7070:Tribolium
castaneum (red flour beetle)
Length = 87
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 agtgaacacatctggtggtatctcagt 80
|||||||||| ||||||||||||||||
Sbjct: 49 agtgaacacagctggtggtatctcagt 75
>RF00720;mir-317;AAZO01004205.1/873-973 121224:Pediculus humanus
corporis (human body louse)
Length = 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 agtgaacacatctggtggtatctcag 79
|||||||||| |||||||||||||||
Sbjct: 63 agtgaacacagctggtggtatctcag 88
>RF00720;mir-317;AADG05001988.1/60488-60578 7460:Apis mellifera
(honey bee)
Length = 91
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 gtgaacacatctggtggtatctcagt 80
||||||||| ||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
