miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00950;mir-927;ABKP02022054.1/6557-6479 377271:Anopheles gambiae
M
Length = 79
Score = 157 bits (79), Expect = 3e-38
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 7 atggtttgttttagaattcctacgctttacccgtgattaaagtagtgcggcaaagcgttt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggtttgttttagaattcctacgctttacccgtgattaaagtagtgcggcaaagcgttt 60
Query: 67 ggattctgaaacgaaacgt 85
|||||||||||||||||||
Sbjct: 61 ggattctgaaacgaaacgt 79
>RF00950;mir-927;AAIZ01011894.1/48584-48662 7234:Drosophila
persimilis
Length = 79
Score = 60.0 bits (30), Expect = 5e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 13 tgttttagaattcctacgctttacccgtgattaaagtagtgcggcaaagcgtttggattc 72
||||||||||||||||||||||||| || || | | | |||||||||||||||||||
Sbjct: 7 tgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttggattc 66
Query: 73 tgaaac 78
||||||
Sbjct: 67 tgaaac 72
>RF00950;mir-927;AADK01018362.1/2317-2241 7091:Bombyx mori
(domestic silkworm)
Length = 77
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 11 tttgttttagaattcctacgctttacccgtgattaaagtagtgcggcaaagcgtttggat 70
|||| |||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 5 tttgctttagaattcctacgctttaccgttgcc--aagtagttgggcaaagcgtttggat 62
Query: 71 tctgaaacgaaa 82
||| ||||||||
Sbjct: 63 tctaaaacgaaa 74
>RF00950;mir-927;AAZX01009215.1/528-602 7425:Nasonia vitripennis
(jewel wasp)
Length = 75
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tttgttttagaattcctacgctttacc 37
|||||||||||||||||||||||||||
Sbjct: 5 tttgttttagaattcctacgctttacc 31
>RF00950;mir-927;AADG05003208.1/18292-18365 7460:Apis mellifera
(honey bee)
Length = 74
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tttgttttagaattcctacgctttacc 37
|||||||||||||||||||||||||||
Sbjct: 5 tttgttttagaattcctacgctttacc 31
>RF00950;mir-927;AAGE02001795.1/170457-170536 7159:Aedes aegypti
(yellow fever mosquito)
Length = 80
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 atggtttgttttagaattcctacgctttacc 37
|||||||| ||||||||||||||||||||||
Sbjct: 1 atggtttgctttagaattcctacgctttacc 31
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 55 ggcaaagcgtttggattctgaaacgaaac 83
|||||||||||||| ||||||||||||||
Sbjct: 50 ggcaaagcgtttgggttctgaaacgaaac 78
>RF00950;mir-927;AAQB01006885.1/24835-24758 7260:Drosophila
willistoni
Length = 78
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 54 cggcaaagcgtttggattctgaaac 78
|||||||||||||||||||||||||
Sbjct: 47 cggcaaagcgtttggattctgaaac 71
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttacc 37
||||||||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttacc 31
>RF00950;mir-927;AABU01002771.1/5147485-5147408 7227:Drosophila
melanogaster (fruit fly)
Length = 78
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 54 cggcaaagcgtttggattctgaaac 78
|||||||||||||||||||||||||
Sbjct: 47 cggcaaagcgtttggattctgaaac 71
>RF00950;mir-927;ABLF01004627.1/10448-10374 7029:Acyrthosiphon
pisum (pea aphid)
Length = 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttacc 37
||||||||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttacc 31
>RF00950;mir-927;AAPP01018483.1/24548-24625 7217:Drosophila
ananassae
Length = 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttacc 37
||||||||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttacc 31
>RF00950;mir-927;AAPU01009479.1/6269-6192 7230:Drosophila
mojavensis
Length = 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gttttagaattcctacgctttacc 37
||||||||||||||||||||||||
Sbjct: 8 gttttagaattcctacgctttacc 31
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 ggcaaagcgtttggattctgaaac 78
||||||||||||||||||||||||
Sbjct: 48 ggcaaagcgtttggattctgaaac 71
>RF00950;mir-927;AAJJ01000142.1/38253-38326 7070:Tribolium
castaneum (red flour beetle)
Length = 74
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 55 ggcaaagcgtttggattctgaaacgaa 81
|||||||||||||||||||||| ||||
Sbjct: 44 ggcaaagcgtttggattctgaatcgaa 70
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttacc 37
||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttacc 31
>RF00950;mir-927;AAZO01006968.1/5753-5674 121224:Pediculus humanus
corporis (human body louse)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tttagaattcctacgctttacc 37
||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttacc 31
