miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01916;mir-988;AAAB01008807.1/10005268-10005171 180454:Anopheles
gambiae str. PEST
Length = 98
Score = 194 bits (98), Expect = 2e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 5 ggagcattggacattgccggtgtgtgttttgtgacaatgagatttaatagtttaagttca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagcattggacattgccggtgtgtgttttgtgacaatgagatttaatagtttaagttca 60
Query: 65 tccccttgttgcaaacctcacgctggcggtgtttccga 102
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccccttgttgcaaacctcacgctggcggtgtttccga 98
>RF01916;mir-988;AAWU01031362.1/14271-14365 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 95
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 62 tcatccccttgttgcaaacctcacgctggcggtg 95
||||||||||||||||||||||||||| ||||||
Sbjct: 56 tcatccccttgttgcaaacctcacgcttgcggtg 89
>RF01916;mir-988;AAGE02017684.1/78072-77982 7159:Aedes aegypti
(yellow fever mosquito)
Length = 91
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 tcatccccttgttgcaaacctcacgctggcggt 94
||||||||||||||||||||||||||| |||||
Sbjct: 54 tcatccccttgttgcaaacctcacgcttgcggt 86
>RF01916;mir-988;AAPP01018719.1/1940-2034 7217:Drosophila
ananassae
Length = 95
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 62 tcatccccttgttgcaaacctcacgc 87
||||||||||||||||||||||||||
Sbjct: 54 tcatccccttgttgcaaacctcacgc 79
>RF01916;mir-988;AADE01001322.1/5472-5565 46245:Drosophila
pseudoobscura pseudoobscura
Length = 94
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 62 tcatccccttgttgcaaacctcacgc 87
||||||||||||||||||||||||||
Sbjct: 54 tcatccccttgttgcaaacctcacgc 79
>RF01916;mir-988;AASS01029226.1/300-392 7240:Drosophila simulans
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 62 tcatccccttgttgcaaacctcacgc 87
||||||||||||||||||||||||||
Sbjct: 54 tcatccccttgttgcaaacctcacgc 79
>RF01916;mir-988;AANI01014949.1/118376-118469 7244:Drosophila
virilis
Length = 94
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 catccccttgttgcaaacctcacgc 87
|||||||||||||||||||||||||
Sbjct: 56 catccccttgttgcaaacctcacgc 80
>RF01916;mir-988;AAQB01009924.1/1034111-1034206 7260:Drosophila
willistoni
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 atccccttgttgcaaacctcacgc 87
||||||||||||||||||||||||
Sbjct: 56 atccccttgttgcaaacctcacgc 79
