miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00727;bantam;AADG05005002.1/2155-2243 7460:Apis mellifera
(honey bee)
Length = 89
Score = 172 bits (87), Expect = 5e-43
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 tcgaaaacgaaactggttttcacaatgatttgacagatagattcgattctgagatcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tcgaaaacgaaactggttttcacaatgatttgacagatagattcgattctgagatcattg 62
Query: 61 tgaaagctgattttgttgaaaagtcga 87
|||||||||||||||||||||||||||
Sbjct: 63 tgaaagctgattttgttgaaaagtcga 89
>RF00727;bantam;AAZX01004974.1/17134-17222 7425:Nasonia
vitripennis (jewel wasp)
Length = 89
Score = 117 bits (59), Expect = 2e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 7 acgaaactggttttcacaatgatttgacagatagattcgattctgagatcattgtgaaag 66
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 9 acgaaactggttttcacaatgatttgacagatgtatttgattctgagatcattgtgaaag 68
Query: 67 ctgattttgtt 77
|||||||||||
Sbjct: 69 ctgattttgtt 79
>RF00727;bantam;AAJJ01000881.1/39195-39283 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 117 bits (59), Expect = 2e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 7 acgaaactggttttcacaatgatttgacagatagattcgattctgagatcattgtgaaag 66
|||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 9 acgaaactggttttcacagtgatttgacagatatatttgattctgagatcattgtgaaag 68
Query: 67 ctgattttgtt 77
|||||||||||
Sbjct: 69 ctgattttgtt 79
>RF00727;bantam;AAZO01005717.1/66950-67042 121224:Pediculus
humanus corporis (human body louse)
Length = 93
Score = 95.6 bits (48), Expect = 9e-20
Identities = 71/78 (91%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 3 gaaaacgaaactggttttcacaatgatttgacagatagatt---cgattctgagatcatt 59
|||||||||||||||||||||||||||||| ||||||| || ||||||||||||||
Sbjct: 5 gaaaacgaaactggttttcacaatgatttgccagatagtttttgttattctgagatcatt 64
Query: 60 gtgaaagctgattttgtt 77
||||||||||||||||||
Sbjct: 65 gtgaaagctgattttgtt 82
>RF00727;bantam;AADK01008828.1/6468-6379 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 87.7 bits (44), Expect = 2e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 7 acgaaactggttttcacaatgatttgacagatagattcg-attctgagatcattgtgaaa 65
|||||||||||||||| ||||||||||||||| | || | ||||||||||||||||||||
Sbjct: 9 acgaaactggttttcataatgatttgacagattgttttgtattctgagatcattgtgaaa 68
Query: 66 gctgattttgtt 77
||| ||||||||
Sbjct: 69 gctaattttgtt 80
>RF00727;bantam;ABJB010305858.1/1270-1184 6945:Ixodes scapularis
(black-legged tick)
Length = 87
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 48 tctgagatcattgtgaaagctgattttgttga 79
||||||||||||||||||||||||||||||||
Sbjct: 51 tctgagatcattgtgaaagctgattttgttga 82
>RF00727;bantam;AASC02061937.1/7510-7417 6500:Aplysia californica
(California sea hare)
Length = 94
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 48 tctgagatcattgtgaaagctgattttgt 76
|||||||||||||||||| ||||||||||
Sbjct: 54 tctgagatcattgtgaaaactgattttgt 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 10 aaactggttttcacaatgatttgacagata 39
||||||||||||||| ||||||| ||||||
Sbjct: 12 aaactggttttcacagtgatttgccagata 41
>RF00727;bantam;ABLF01005214.1/5435-5342 7029:Acyrthosiphon pisum
(pea aphid)
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 46 attctgagatcattgtgaaagctgattt 73
||||||||||||||||||||||| ||||
Sbjct: 53 attctgagatcattgtgaaagctaattt 80
>RF00727;bantam;AAWU01005949.1/119500-119406 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 95
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgagatcattgtgaaagctgattttgt 76
|||||||||| ||||||||||||||||
Sbjct: 56 tgagatcattttgaaagctgattttgt 82
>RF00727;bantam;AAGE02003301.1/208408-208314 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgagatcattgtgaaagctgattttgt 76
|||||||||| ||||||||||||||||
Sbjct: 57 tgagatcattttgaaagctgattttgt 83
>RF00727;bantam;AAPU01011505.1/2277-2366 7230:Drosophila
mojavensis
Length = 90
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgagatcattgtgaaagctgattttgt 76
|||||||||| ||||||||||||||||
Sbjct: 53 tgagatcattttgaaagctgattttgt 79
>RF00727;bantam;AANI01017339.1/10975-11064 7244:Drosophila virilis
Length = 90
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgagatcattgtgaaagctgattttgt 76
|||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattttgaaagctgattttgt 78