miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00241;mir-8;AADG05004155.1/1299-1373 7460:Apis mellifera (honey
bee)
Length = 75
Score = 149 bits (75), Expect = 7e-36
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 6 atctgttcacatcttaccgggcagcattagattgaagttgaccttctaatactgtcaggt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atctgttcacatcttaccgggcagcattagattgaagttgaccttctaatactgtcaggt 60
Query: 66 aaagatgtcgtcagg 80
|||||||||||||||
Sbjct: 61 aaagatgtcgtcagg 75
>RF00241;mir-8;AAJJ01001355.1/29616-29540 7070:Tribolium castaneum
(red flour beetle)
Length = 77
Score = 71.9 bits (36), Expect = 1e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 8 ctgttcacatcttaccgggcagcattagattgaagttga-ccttctaatactgtcaggta 66
||||| ||||||||||||||||||||||||| | || | |||||||||||||||||||
Sbjct: 3 ctgttaacatcttaccgggcagcattagattacattttatacttctaatactgtcaggta 62
Query: 67 aagatgtc 74
||||||||
Sbjct: 63 aagatgtc 70
>RF00241;mir-8;AAQB01006282.1/186530-186609 7260:Drosophila
willistoni
Length = 80
Score = 65.9 bits (33), Expect = 8e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 6 atctgttcacatcttaccgggcagcattagatt 38
|||||||||||||||||||||||||||||||||
Sbjct: 1 atctgttcacatcttaccgggcagcattagatt 33
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 50 tctaatactgtcaggtaaagatgtcgtc 77
||||||||||||||||||||||||||||
Sbjct: 50 tctaatactgtcaggtaaagatgtcgtc 77
>RF00241;mir-8;AAPU01010182.1/5430-5508 7230:Drosophila mojavensis
Length = 79
Score = 65.9 bits (33), Expect = 8e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 6 atctgttcacatcttaccgggcagcattagatt 38
|||||||||||||||||||||||||||||||||
Sbjct: 1 atctgttcacatcttaccgggcagcattagatt 33
>RF00241;mir-8;AAZO01008551.1/16828-16905 121224:Pediculus humanus
corporis (human body louse)
Length = 78
Score = 63.9 bits (32), Expect = 3e-10
Identities = 65/75 (86%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 8 ctgttcacatcttaccgggcagcattagattgaagtt--gaccttctaatactgtcaggt 65
||||| ||||||||||||||||||||||||||| || | |||||||||||||||||
Sbjct: 3 ctgtttacatcttaccgggcagcattagattgattttaagtaattctaatactgtcaggt 62
Query: 66 aaagatgtcgtcagg 80
|| |||||| |||||
Sbjct: 63 aatgatgtcctcagg 77
>RF00241;mir-8;AAAB01008986.1/3020387-3020310 180454:Anopheles
gambiae str. PEST
Length = 78
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 7 tctgttcacatcttaccgggcagcattagat 37
|||||||||||||||||||||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagat 32
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 49 ttctaatactgtcaggtaaagatgtcgtc 77
|||||||||||||||||||||||||||||
Sbjct: 47 ttctaatactgtcaggtaaagatgtcgtc 75
>RF00241;mir-8;BAAB01175925.1/123-47 7091:Bombyx mori (domestic
silkworm)
Length = 77
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 49 ttctaatactgtcaggtaaagatgtcgtc 77
|||||||||||||||||||||||||||||
Sbjct: 46 ttctaatactgtcaggtaaagatgtcgtc 74
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 gttcacatcttaccgggcagcattaga 36
|||| ||||||||||||||||||||||
Sbjct: 5 gttcgcatcttaccgggcagcattaga 31
>RF00241;mir-8;ABJB010621523.1/197-271 6945:Ixodes scapularis
(black-legged tick)
Length = 75
Score = 58.0 bits (29), Expect = 2e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 14 acatcttaccgggcagcattagattgaagttgaccttctaatactgtcaggtaaagatgt 73
|||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 9 acatcttaccagacagcattagattgagcctgat-ttctaatactgtcaggtaaagatgt 67
Query: 74 c 74
|
Sbjct: 68 c 68
>RF00241;mir-8;ABLF01004189.1/21301-21379 7029:Acyrthosiphon pisum
(pea aphid)
Length = 79
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 tctaatactgtcaggtaaagatgtcgtcag 79
|||||||||||||||||| |||||| ||||
Sbjct: 48 tctaatactgtcaggtaatgatgtcctcag 77
