miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00832;mir-71;AADG05000005.1/24640-24697 7460:Apis mellifera
(honey bee)
Length = 58
Score = 115 bits (58), Expect = 1e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagatgttctcacgctatcgcgtctcactatcttgtctttc 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagatgttctcacgctatcgcgtctcactatcttgtctttc 58
>RF00832;mir-71;AASC02030054.1/9912-9965 6500:Aplysia californica
(California sea hare)
Length = 54
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagatgtt 49
|||||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagatgtt 25
>RF00832;mir-71;AAZO01007079.1/39885-39949 121224:Pediculus
humanus corporis (human body louse)
Length = 65
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagatgtt 49
|||||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagatgtt 25
>RF00832;mir-71;AAJJ01001714.1/2180-2239 7070:Tribolium castaneum
(red flour beetle)
Length = 60
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagatgtt 49
|||||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagatgtt 25
>RF00832;mir-71;AADK01011192.1/8467-8525 7091:Bombyx mori
(domestic silkworm)
Length = 59
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagatgt 48
||||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagatgt 24
>RF00832;mir-71;ABLF01009126.1/5038-4980 7029:Acyrthosiphon pisum
(pea aphid)
Length = 59
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagatg 47
|||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagatg 23
>RF00832;mir-71;AAZX01013101.1/18156-18214 7425:Nasonia
vitripennis (jewel wasp)
Length = 59
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagatg 47
|||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagatg 23
>RF00832;mir-71;ABJB010692301.1/11781-11722 6945:Ixodes scapularis
(black-legged tick)
Length = 60
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagatg 47
|||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagatg 23
>RF00832;mir-71;AAWT01093310.1/38829-38766 79327:Schmidtea
mediterranea
Length = 64
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagat 46
||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagat 22
>RF00832;mir-71;AAGJ02037127.1/41214-41272 7668:Strongylocentrotus
purpuratus
Length = 59
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagat 46
||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagat 22
>RF00832;mir-71;ABEP02027218.1/11123-11067 7739:Branchiostoma
floridae (Florida lancelet)
Length = 57
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tgaaagacatgggtagtgagat 46
||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagat 22
