miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00052;lin-4;AADG05003176.1/75746-75815 7460:Apis mellifera
(honey bee)
Length = 70
Score = 139 bits (70), Expect = 8e-33
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 18 gccggtcccctgagaccctaacttgtgacgtcgcgaccgatatctcacaggctagattct 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccggtcccctgagaccctaacttgtgacgtcgcgaccgatatctcacaggctagattct 60
Query: 78 ctggtattgg 87
||||||||||
Sbjct: 61 ctggtattgg 70
>RF00052;lin-4;AAWZ01018120.1/1937-2007 28377:Anolis carolinensis
(green anole)
Length = 71
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ccctgagaccctaacttgtgacgt 48
||||||||||||||||||||||||
Sbjct: 8 ccctgagaccctaacttgtgacgt 31
>RF00052;lin-4;BX284646.4/38142-38072 7955:Danio rerio (zebrafish)
Length = 71
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ccctgagaccctaacttgtgacgt 48
||||||||||||||||||||||||
Sbjct: 8 ccctgagaccctaacttgtgacgt 31
>RF00052;lin-4;BX663520.9/242554-242624 7955:Danio rerio
(zebrafish)
Length = 71
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ccctgagaccctaacttgtgacgt 48
||||||||||||||||||||||||
Sbjct: 8 ccctgagaccctaacttgtgacgt 31
>RF00052;lin-4;CAAB01001308.1/53300-53230 31033:Takifugu rubripes
Length = 71
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ccctgagaccctaacttgtgacgt 48
||||||||||||||||||||||||
Sbjct: 8 ccctgagaccctaacttgtgacgt 31
>RF00052;lin-4;BAAF04027540.1/8397-8327 8090:Oryzias latipes
(Japanese medaka)
Length = 71
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ccctgagaccctaacttgtgacgt 48
||||||||||||||||||||||||
Sbjct: 8 ccctgagaccctaacttgtgacgt 31
>RF00052;lin-4;BAAF04030494.1/1393-1463 8090:Oryzias latipes
(Japanese medaka)
Length = 71
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ccctgagaccctaacttgtgacgt 48
||||||||||||||||||||||||
Sbjct: 8 ccctgagaccctaacttgtgacgt 31
>RF00052;lin-4;ABKQ02024066.1/14943-15012 377270:Anopheles gambiae
S
Length = 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 ccctgagaccctaacttgtgac 46
||||||||||||||||||||||
Sbjct: 8 ccctgagaccctaacttgtgac 29
>RF00052;lin-4;AAPU01010514.1/89504-89436 7230:Drosophila
mojavensis
Length = 69
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 ccctgagaccctaacttgtgac 46
||||||||||||||||||||||
Sbjct: 8 ccctgagaccctaacttgtgac 29