miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;AADG05003940.1/44836-44746 7460:Apis mellifera
          (honey bee)
          Length = 91

 Score =  180 bits (91), Expect = 2e-45
 Identities = 91/91 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcttggactctgtaaatggcactggaagaattcacgggggatttaagaaacgggcccgt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  agcttggactctgtaaatggcactggaagaattcacgggggatttaagaaacgggcccgt 60

                                         
Query: 61 ggagctcccgtgtcatacacagcgtccggct 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 ggagctcccgtgtcatacacagcgtccggct 91




>RF00706;mir-263;AAZX01007729.1/30973-30881 7425:Nasonia
          vitripennis (jewel wasp)
          Length = 93

 Score =  109 bits (55), Expect = 6e-24
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcttggactctgtaaatggcactggaagaattcacgggggatttaagaaacgggcccgt 60
          |||||||  ||||| ||||||||||||||||||||||||||| || || ||| | |||||
Sbjct: 2  agcttgggttctgtcaatggcactggaagaattcacgggggaatttagcaacagtcccgt 61

                                         
Query: 61 ggagctcccgtgtcatacacagcgtccggct 91
          ||| |||||||||||||||||||||||||||
Sbjct: 62 ggaactcccgtgtcatacacagcgtccggct 92




>RF00706;mir-263;AADE01000074.1/40884-40796 46245:Drosophila
          pseudoobscura pseudoobscura
          Length = 89

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 aatggcactggaagaattcacgggg 40
          |||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacgggg 40




>RF00706;mir-263;AC011065.6/94391-94302 7227:Drosophila
          melanogaster (fruit fly)
          Length = 90

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 aatggcactggaagaattcacgggg 40
          |||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacgggg 40




>RF00706;mir-263;AAPU01010625.1/4665-4753 7230:Drosophila
          mojavensis
          Length = 89

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 aatggcactggaagaattcacgggg 40
          |||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacgggg 40




>RF00706;mir-263;AAJJ01000157.1/103377-103289 7070:Tribolium
          castaneum (red flour beetle)
          Length = 89

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 aatggcactggaagaattcacgggg 40
          |||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacgggg 40




>RF00706;mir-263;ABJB010285488.1/4151-4241 6945:Ixodes scapularis
          (black-legged tick)
          Length = 91

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 aatggcactggaagaattcacgggg 40
          |||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacgggg 40




>RF00706;mir-263;BAAB01106279.1/2818-2907 7091:Bombyx mori
          (domestic silkworm)
          Length = 90

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 aatggcactggaagaattcacggg 39
          ||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggg 39




>RF00706;mir-263;AAWU01014939.1/4076-3988 7176:Culex
          quinquefasciatus (southern house mosquito)
          Length = 89

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 aatggcactggaagaattcacggg 39
          ||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggg 39




>RF00706;mir-263;AAGE02027430.1/4828-4738 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 91

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 aatggcactggaagaattcacggg 39
          ||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggg 39




>RF00706;mir-263;AAAB01008944.1/325742-325831 180454:Anopheles
          gambiae str. PEST
          Length = 90

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 aatggcactggaagaattcacggg 39
          ||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggg 39




>RF00706;mir-263;ABLF01028761.1/10726-10634 7029:Acyrthosiphon
          pisum (pea aphid)
          Length = 93

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 15 aaatggcactggaagaattcacgggg 40
          ||||||||||| ||||||||||||||
Sbjct: 15 aaatggcactgaaagaattcacgggg 40