miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00637;mir-276;AADG05002822.1/76702-76793 7460:Apis mellifera
(honey bee)
Length = 92
Score = 167 bits (84), Expect = 3e-41
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 tggtagagatccagcagcgaggtatagagttcctacgtagtgttcagaaagtaggaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tggtagagatccagcagcgaggtatagagttcctacgtagtgttcagaaagtaggaactt 62
Query: 61 cataccgtgctcttggacttgccg 84
||||||||||||||||||||||||
Sbjct: 63 cataccgtgctcttggacttgccg 86
>RF00637;mir-276;AAZX01001999.1/5300-5391 7425:Nasonia vitripennis
(jewel wasp)
Length = 92
Score = 151 bits (76), Expect = 2e-36
Identities = 82/84 (97%)
Strand = Plus / Plus
Query: 1 tggtagagatccagcagcgaggtatagagttcctacgtagtgttcagaaagtaggaactt 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3 tggtagagatccagcagcgaggtatagagttcctacgtagatttcagaaagtaggaactt 62
Query: 61 cataccgtgctcttggacttgccg 84
||||||||||||||||||||||||
Sbjct: 63 cataccgtgctcttggacttgccg 86
>RF00637;mir-276;AADK01021256.1/890-979 7091:Bombyx mori (domestic
silkworm)
Length = 90
Score = 65.9 bits (33), Expect = 7e-11
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacgtagtgttcagaaagtaggaacttcataccgtgctcttg 75
|||||||||||||||||||||||| || | | | |||||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgta-tgctaacactgtaggaacttcataccgtgctcttg 75
Query: 76 g 76
|
Sbjct: 76 g 76
>RF00637;mir-276;ABLF01003513.1/4658-4754 7029:Acyrthosiphon pisum
(pea aphid)
Length = 97
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttggacttgc 82
||||||||||||||||||||||||||||||||
Sbjct: 59 gtaggaacttcataccgtgctcttggacttgc 90
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacgt 38
|||||||||||||||||||||||
Sbjct: 16 agcgaggtatagagttcctacgt 38
>RF00637;mir-276;AAZO01003220.1/6657-6747 121224:Pediculus humanus
corporis (human body louse)
Length = 91
Score = 60.0 bits (30), Expect = 5e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 12 cagcagcgaggtatagagttcctacgtagtgttcagaaagtaggaacttcataccgtgct 71
||||||||||||||||||||||||||| | | | |||||||||||||||||||||
Sbjct: 13 cagcagcgaggtatagagttcctacgtgctttggttactgtaggaacttcataccgtgct 72
Query: 72 cttgga 77
||||||
Sbjct: 73 cttgga 78
>RF00637;mir-276;AAJJ01000143.1/58311-58223 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 60.0 bits (30), Expect = 5e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 16 agcgaggtatagagttcctacgtagtgttcagaaagtaggaacttcataccgtgctcttg 75
||||||||||||||||||||||| | || | |||||||||||||||||||||||||
Sbjct: 15 agcgaggtatagagttcctacgtgatttttcggctgtaggaacttcataccgtgctcttg 74
Query: 76 ga 77
||
Sbjct: 75 ga 76
>RF00637;mir-276;AAGE02007617.1/38970-39063 7159:Aedes aegypti
(yellow fever mosquito)
Length = 94
Score = 56.0 bits (28), Expect = 7e-08
Identities = 58/66 (87%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 15 cagcgaggtatagagttcctacgtagtgt-tcagaaa---gtaggaacttcataccgtgc 70
|||||||||||||||||||||||| | || | |||| ||||||||||||||||||||
Sbjct: 16 cagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcataccgtgc 75
Query: 71 tcttgg 76
||||||
Sbjct: 76 tcttgg 81
>RF00637;mir-276;ABKQ02021477.1/23012-22918 377270:Anopheles
gambiae S
Length = 95
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||||||||||||||||||||
Sbjct: 57 gtaggaacttcataccgtgctcttgga 83
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cagcgaggtatagagttcctacg 37
|||||||||||||||||||||||
Sbjct: 16 cagcgaggtatagagttcctacg 38
>RF00637;mir-276;AANI01017424.1/110847-110939 7244:Drosophila
virilis
Length = 93
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||||||||||||||||||||
Sbjct: 55 gtaggaacttcataccgtgctcttgga 81
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cagcgaggtatagagttcctacgt 38
||||||||||||||||||||||||
Sbjct: 16 cagcgaggtatagagttcctacgt 39
>RF00637;mir-276;AAWU01010561.1/6178-6274 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 97
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 taggaacttcataccgtgctcttgga 77
||||||||||||||||||||||||||
Sbjct: 60 taggaacttcataccgtgctcttgga 85
>RF00637;mir-276;AAGE02000417.1/11129-11035 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 taggaacttcataccgtgctcttgga 77
||||||||||||||||||||||||||
Sbjct: 58 taggaacttcataccgtgctcttgga 83
>RF00637;mir-276;ABKP02026752.1/53325-53226 377271:Anopheles
gambiae M
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 taggaacttcataccgtgctcttgga 77
||||||||||||||||||||||||||
Sbjct: 63 taggaacttcataccgtgctcttgga 88
>RF00637;mir-276;ABKQ02021479.1/6963-6864 377270:Anopheles gambiae
S
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 taggaacttcataccgtgctcttgga 77
||||||||||||||||||||||||||
Sbjct: 63 taggaacttcataccgtgctcttgga 88
>RF00637;mir-276;AADE01001409.1/12453-12359 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cagcgaggtatagagttcctacgt 38
||||||||||||||||||||||||
Sbjct: 18 cagcgaggtatagagttcctacgt 41
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||| ||||||||||||||||
Sbjct: 57 gtaggaacttaataccgtgctcttgga 83
>RF00637;mir-276;AE014296.4/10312890-10312983 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cagcgaggtatagagttcctacgt 38
||||||||||||||||||||||||
Sbjct: 18 cagcgaggtatagagttcctacgt 41
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||| ||||||||||||||||
Sbjct: 56 gtaggaacttaataccgtgctcttgga 82
>RF00637;mir-276;AAPU01011641.1/29322-29227 7230:Drosophila
mojavensis
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cagcgaggtatagagttcctacgt 38
||||||||||||||||||||||||
Sbjct: 18 cagcgaggtatagagttcctacgt 41
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||| ||||||||||||||||
Sbjct: 58 gtaggaacttaataccgtgctcttgga 84
