miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00747;mir-283;AADG05008150.1/23792-23703 7460:Apis mellifera
(honey bee)
Length = 90
Score = 178 bits (90), Expect = 9e-45
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 3 taatctggtgatgtagtcaaatatcagctggtaattctgggattttgacaataacccagg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatctggtgatgtagtcaaatatcagctggtaattctgggattttgacaataacccagg 60
Query: 63 attcttgctggtatccggctacgaactgga 92
||||||||||||||||||||||||||||||
Sbjct: 61 attcttgctggtatccggctacgaactgga 90
>RF00747;mir-283;AAZX01000006.1/24204-24295 7425:Nasonia
vitripennis (jewel wasp)
Length = 92
Score = 79.8 bits (40), Expect = 6e-15
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 15 gtagtcaaatatcagctggtaattctgggattttgacaat--aacccaggattcttgctg 72
||||||||||||||||||||||||||||||| | | || | ||||||||||||||||
Sbjct: 13 gtagtcaaatatcagctggtaattctgggatacttattatgcagcccaggattcttgctg 72
Query: 73 gtatccggctacgaactgg 91
|||||||| ||||||||||
Sbjct: 73 gtatccggttacgaactgg 91
>RF00747;mir-283;AAQB01006319.1/8842-8742 7260:Drosophila
willistoni
Length = 101
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 19 aaatatcagctggtaattctggga 42
>RF00747;mir-283;AAPU01008564.1/40966-41063 7230:Drosophila
mojavensis
Length = 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggga 44
||||||||||||||||||||||||
Sbjct: 19 aaatatcagctggtaattctggga 42
>RF00747;mir-283;BAAB01105947.1/481-397 7091:Bombyx mori (domestic
silkworm)
Length = 85
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggg 43
|||||||||||||||||||||||
Sbjct: 17 aaatatcagctggtaattctggg 39
>RF00747;mir-283;AAJJ01001605.1/25781-25866 7070:Tribolium
castaneum (red flour beetle)
Length = 86
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aaatatcagctggtaattctggg 43
|||||||||||||||||||||||
Sbjct: 17 aaatatcagctggtaattctggg 39
>RF00747;mir-283;AAWU01005348.1/2399-2495 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 aatatcagctggtaattctggg 43
||||||||||||||||||||||
Sbjct: 18 aatatcagctggtaattctggg 39
>RF00747;mir-283;AAGE02004323.1/32429-32333 7159:Aedes aegypti
(yellow fever mosquito)
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 aatatcagctggtaattctggg 43
||||||||||||||||||||||
Sbjct: 18 aatatcagctggtaattctggg 39