miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00720;mir-317;AADG05001988.1/60488-60578 7460:Apis mellifera
(honey bee)
Length = 91
Score = 178 bits (90), Expect = 8e-45
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gctctcggagaacagggagccactctgcgttcactcggtgggtaatgaagcgggtgaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctctcggagaacagggagccactctgcgttcactcggtgggtaatgaagcgggtgaaca 60
Query: 61 cagctggtggtatctcagttttctgagggc 90
||||||||||||||||||||||||||||||
Sbjct: 61 cagctggtggtatctcagttttctgagggc 90
>RF00720;mir-317;AAJJ01000475.1/38254-38168 7070:Tribolium
castaneum (red flour beetle)
Length = 87
Score = 56.0 bits (28), Expect = 8e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagttt 81
||||||||||||||||||||||||||||
Sbjct: 50 gtgaacacagctggtggtatctcagttt 77
>RF00720;mir-317;ABLF01040770.1/5816-5924 7029:Acyrthosiphon pisum
(pea aphid)
Length = 109
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagtt 80
|||||||||||||||||||||||||||
Sbjct: 72 gtgaacacagctggtggtatctcagtt 98
>RF00720;mir-317;AADK01000441.1/12625-12537 7091:Bombyx mori
(domestic silkworm)
Length = 89
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagtt 80
|||||||||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtatctcagtt 78
>RF00720;mir-317;AAGE02012640.1/88438-88525 7159:Aedes aegypti
(yellow fever mosquito)
Length = 88
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagt 79
||||||||||||||||||||||||||
Sbjct: 51 gtgaacacagctggtggtatctcagt 76
>RF00720;mir-317;AAZO01004205.1/873-973 121224:Pediculus humanus
corporis (human body louse)
Length = 101
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcag 78
|||||||||||||||||||||||||
Sbjct: 64 gtgaacacagctggtggtatctcag 88
>RF00720;mir-317;AAAB01008859.1/3281503-3281595 180454:Anopheles
gambiae str. PEST
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagt 79
||||||||| ||||||||||||||||
Sbjct: 56 gtgaacacatctggtggtatctcagt 81
>RF00720;mir-317;ABJB010210559.1/10170-10082 6945:Ixodes
scapularis (black-legged tick)
Length = 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagt 79
|||||||||||||||||||| |||||
Sbjct: 52 gtgaacacagctggtggtatatcagt 77
