miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00947;mir-929;AADG05005366.1/7427-7326 7460:Apis mellifera (honey
           bee)
          Length = 102

 Score =  198 bits (100), Expect = 9e-51
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttaactggggtcaaattgactctagtagggagtccctgcattcaatatggcgacttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   acttaactggggtcaaattgactctagtagggagtccctgcattcaatatggcgacttcc 62

                                                   
Query: 61  taatagagtcaggctgactccttttaagacgttcaacgga 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  taatagagtcaggctgactccttttaagacgttcaacgga 102




>RF00947;mir-929;AAZX01003135.1/832-932 7425:Nasonia vitripennis
          (jewel wasp)
          Length = 101

 Score =  172 bits (87), Expect = 5e-43
 Identities = 90/91 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  acttaactggggtcaaattgactctagtagggagtccctgcattcaatatggcgacttcc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3  acttaactggggtcaaattgactctagtagggagtccctgcattcaatatggcgacttcc 62

                                         
Query: 61 taatagagtcaggctgactccttttaagacg 91
          ||| |||||||||||||||||||||||||||
Sbjct: 63 taacagagtcaggctgactccttttaagacg 93




>RF00947;mir-929;AAJJ01001068.1/14929-15025 7070:Tribolium
          castaneum (red flour beetle)
          Length = 97

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 9  ggggtcaaattgactctagtagggagtcc 37
          |||||||||||||||||||||||||||||
Sbjct: 11 ggggtcaaattgactctagtagggagtcc 39




>RF00947;mir-929;AAZO01002930.1/51339-51440 121224:Pediculus
          humanus corporis (human body louse)
          Length = 102

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 12 gtcaaattgactctagtagggagtcc 37
          ||||||||||||||||||||||||||
Sbjct: 14 gtcaaattgactctagtagggagtcc 39




>RF00947;mir-929;ABLF01011736.1/10860-10764 7029:Acyrthosiphon
          pisum (pea aphid)
          Length = 97

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tcaaattgactctagtagggagtcc 37
          |||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcc 39




>RF00947;mir-929;AAQB01008629.1/27335-27241 7260:Drosophila
          willistoni
          Length = 95

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tcaaattgactctagtagggagtcc 37
          |||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcc 39




>RF00947;mir-929;AAFS01002785.1/3282-3188 46245:Drosophila
          pseudoobscura pseudoobscura
          Length = 95

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tcaaattgactctagtagggagtcc 37
          |||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcc 39




>RF00947;mir-929;AABU01002551.1/121293-121386 7227:Drosophila
          melanogaster (fruit fly)
          Length = 94

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tcaaattgactctagtagggagtcc 37
          |||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcc 39




>RF00947;mir-929;AANI01014363.1/204913-205006 7244:Drosophila
          virilis
          Length = 94

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tcaaattgactctagtagggagtcc 37
          |||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcc 39




>RF00947;mir-929;AAPU01011179.1/143817-143911 7230:Drosophila
          mojavensis
          Length = 95

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tcaaattgactctagtagggagtcc 37
          |||||||||||||||||||||||||
Sbjct: 15 tcaaattgactctagtagggagtcc 39




>RF00947;mir-929;AAWU01005610.1/5708-5613 7176:Culex
          quinquefasciatus (southern house mosquito)
          Length = 96

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 caaattgactctagtagggagtcc 37
          ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39




>RF00947;mir-929;AAGE02012461.1/76734-76639 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 96

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 caaattgactctagtagggagtcc 37
          ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39




>RF00947;mir-929;BAAB01013302.1/660-751 7091:Bombyx mori (domestic
          silkworm)
          Length = 92

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 aaattgactctagtagggagtcc 37
          |||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39




>RF00947;mir-929;ABKP02012769.1/7854-7759 377271:Anopheles gambiae
          M
          Length = 96

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 aaattgactctagtagggagtcc 37
          |||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39




>RF00947;mir-929;AAAB01008089.1/34548-34645 180454:Anopheles
          gambiae str. PEST
          Length = 98

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 aaattgactctagtagggagtcc 37
          |||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39