miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01914;mir-932;AAZX01016972.1/3751-3654 7425:Nasonia vitripennis
          (jewel wasp)
          Length = 98

 Score = 67.9 bits (34), Expect = 2e-11
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 4  cgcgttgcctcttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||||||||||||
Sbjct: 4  cgcgttgcctcttcaattccgtagtgcattgcag 37




>RF01914;mir-932;AAPU01010633.1/174895-174800 7230:Drosophila
          mojavensis
          Length = 96

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 15 ttcaattccgtagtgcattgcagatgatt 43
          ||||||||||||||||||||||| |||||
Sbjct: 15 ttcaattccgtagtgcattgcagttgatt 43




>RF01914;mir-932;AAJJ01002053.1/7803-7708 7070:Tribolium castaneum
          (red flour beetle)
          Length = 96

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tcttcaattccgtagtgcattgcag 37
          |||||||||||||||||||||||||
Sbjct: 13 tcttcaattccgtagtgcattgcag 37




>RF01914;mir-932;BAAB01137739.1/1246-1338 7091:Bombyx mori
          (domestic silkworm)
          Length = 93

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 cttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||
Sbjct: 14 cttcaattccgtagtgcattgcag 37




>RF01914;mir-932;AAWU01016737.1/86715-86620 7176:Culex
          quinquefasciatus (southern house mosquito)
          Length = 96

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 cttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||
Sbjct: 14 cttcaattccgtagtgcattgcag 37




>RF01914;mir-932;AAGE02028378.1/72320-72226 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 95

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 cttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||
Sbjct: 14 cttcaattccgtagtgcattgcag 37




>RF01914;mir-932;AAPP01015704.1/12304-12399 7217:Drosophila
          ananassae
          Length = 96

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 ttcaattccgtagtgcattgcag 37
          |||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcag 37




>RF01914;mir-932;AE014134.5/6902062-6902157 7227:Drosophila
          melanogaster (fruit fly)
          Length = 96

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 ttcaattccgtagtgcattgcag 37
          |||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcag 37




>RF01914;mir-932;ABKP02013651.1/12768-12666 377271:Anopheles
          gambiae M
          Length = 103

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||
Sbjct: 17 tcaattccgtagtgcattgcag 38




>RF01914;mir-932;AAQB01006833.1/85025-84930 7260:Drosophila
          willistoni
          Length = 96

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||
Sbjct: 16 tcaattccgtagtgcattgcag 37




>RF01914;mir-932;AAFS01000131.1/45997-46096 46245:Drosophila
          pseudoobscura pseudoobscura
          Length = 100

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||
Sbjct: 16 tcaattccgtagtgcattgcag 37