miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00727;bantam;AADK01008828.1/6468-6379 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 172 bits (87), Expect = 5e-43
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 4 aaggaactacgaaactggttttcataatgatttgacagattgttttgtattctgagatca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggaactacgaaactggttttcataatgatttgacagattgttttgtattctgagatca 60
Query: 64 ttgtgaaagctaattttgttcctggta 90
|||||||||||||||||||||||||||
Sbjct: 61 ttgtgaaagctaattttgttcctggta 87
>RF00727;bantam;AAZX01004974.1/17134-17222 7425:Nasonia
vitripennis (jewel wasp)
Length = 89
Score = 91.7 bits (46), Expect = 1e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 acgaaactggttttcataatgatttgacagattgttttgtattctgagatcattgtgaaa 71
|||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 9 acgaaactggttttcacaatgatttgacagatgtatttg-attctgagatcattgtgaaa 67
Query: 72 gctaattttgttcc 85
||| ||||||||||
Sbjct: 68 gctgattttgttcc 81
>RF00727;bantam;AADG05005002.1/2155-2243 7460:Apis mellifera
(honey bee)
Length = 89
Score = 87.7 bits (44), Expect = 2e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 acgaaactggttttcataatgatttgacagattgttttgtattctgagatcattgtgaaa 71
|||||||||||||||| ||||||||||||||| | || | ||||||||||||||||||||
Sbjct: 9 acgaaactggttttcacaatgatttgacagatagattcg-attctgagatcattgtgaaa 67
Query: 72 gctaattttgtt 83
||| ||||||||
Sbjct: 68 gctgattttgtt 79
>RF00727;bantam;AAZO01005717.1/66950-67042 121224:Pediculus
humanus corporis (human body louse)
Length = 93
Score = 85.7 bits (43), Expect = 9e-17
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 12 acgaaactggttttcataatgatttgacagattgttttg--tattctgagatcattgtga 69
|||||||||||||||| ||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 9 acgaaactggttttcacaatgatttgccagatagtttttgttattctgagatcattgtga 68
Query: 70 aagctaattttgtt 83
||||| ||||||||
Sbjct: 69 aagctgattttgtt 82
>RF00727;bantam;AAJJ01000881.1/39195-39283 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 81.8 bits (41), Expect = 1e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 acgaaactggttttcataatgatttgacagattgttttgtattctgagatcattgtgaaa 71
|||||||||||||||| | ||||||||||||| |||| ||||||||||||||||||||
Sbjct: 9 acgaaactggttttcacagtgatttgacagatatatttg-attctgagatcattgtgaaa 67
Query: 72 gctaattttgttc 84
||| |||||||||
Sbjct: 68 gctgattttgttc 80
>RF00727;bantam;ABLF01005214.1/5435-5342 7029:Acyrthosiphon pisum
(pea aphid)
Length = 94
Score = 56.0 bits (28), Expect = 8e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 52 attctgagatcattgtgaaagctaattt 79
||||||||||||||||||||||||||||
Sbjct: 53 attctgagatcattgtgaaagctaattt 80
>RF00727;bantam;ABJB010305858.1/1270-1184 6945:Ixodes scapularis
(black-legged tick)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 54 tctgagatcattgtgaaagctaattttgtt 83
||||||||||||||||||||| ||||||||
Sbjct: 51 tctgagatcattgtgaaagctgattttgtt 80
>RF00728;mir-81;AAQA01000482.1/18100-18000 6279:Brugia malayi
Length = 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tctgagatcattgtgaaagcta 75
||||||||||||||||||||||
Sbjct: 61 tctgagatcattgtgaaagcta 82
