miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00027;let-7;BABH01009736.1/23777-23700 7091:Bombyx mori
(domestic silkworm)
Length = 78
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 14 gcttgttgaggtagtaggttgtatagtacggaaatacaacacataggtgcgactgtatag 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttgttgaggtagtaggttgtatagtacggaaatacaacacataggtgcgactgtatag 60
Query: 74 cctgctaactttccgagc 91
||||||||||||||||||
Sbjct: 61 cctgctaactttccgagc 78
>RF00027;let-7;ABEG01002465.1/18268-18339 135651:Caenorhabditis
brenneri
Length = 72
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gttgaggtagtaggttgtatagt 40
|||||||||||||||||||||||
Sbjct: 4 gttgaggtagtaggttgtatagt 26
>RF00027;let-7;ABKE01000556.1/121-205 54126:Pristionchus pacificus
Length = 85
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 tgaggtagtaggttgtatagtacggaa 46
||||||||||||||||||||| |||||
Sbjct: 6 tgaggtagtaggttgtatagttcggaa 32
>RF00027;let-7;AAGU02067998.1/2847-2772 9785:Loxodonta africana
(African savanna elephant)
Length = 76
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gttgaggtagtaggttgtatagt 40
|||||||||||||||||||||||
Sbjct: 5 gttgaggtagtaggttgtatagt 27
>RF00027;let-7;CAAB01004143.1/18701-18777 31033:Takifugu rubripes
Length = 77
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gttgaggtagtaggttgtatagt 40
|||||||||||||||||||||||
Sbjct: 5 gttgaggtagtaggttgtatagt 27
>RF00027;let-7;AANH01000597.1/43752-43676 69293:Gasterosteus
aculeatus (three-spined stickleback)
Length = 77
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gttgaggtagtaggttgtatagt 40
|||||||||||||||||||||||
Sbjct: 5 gttgaggtagtaggttgtatagt 27
>RF00027;let-7;BAAE01285721.1/657-581 8090:Oryzias latipes
(Japanese medaka)
Length = 77
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 gttgaggtagtaggttgtatagt 40
|||||||||||||||||||||||
Sbjct: 5 gttgaggtagtaggttgtatagt 27
>RF00027;let-7;ABEP02005607.1/34812-34887 7739:Branchiostoma
floridae (Florida lancelet)
Length = 76
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 tgaggtagtaggttgtatagtacggaaatacaaca 54
||||||||||||||||||||| | ||| |||||||
Sbjct: 7 tgaggtagtaggttgtatagttcagaagtacaaca 41
>RF00027;let-7;AADG05003176.1/75207-75290 7460:Apis mellifera
(honey bee)
Length = 84
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 tgaggtagtaggttgtatagtacggaa 46
|||||||||||||||||||||| ||||
Sbjct: 7 tgaggtagtaggttgtatagtagggaa 33
>RF00027;let-7;AAQB01006449.1/358437-358507 7260:Drosophila
willistoni
Length = 71
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttgaggtagtaggttgtatagta 41
|||||||||||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagta 28
>RF00027;let-7;AAIZ01016032.1/2164-2232 7234:Drosophila persimilis
Length = 69
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttgaggtagtaggttgtatagta 41
|||||||||||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagta 28
>RF00027;let-7;AAPP01015675.1/360249-360318 7217:Drosophila
ananassae
Length = 70
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttgaggtagtaggttgtatagta 41
|||||||||||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagta 28
>RF00027;let-7;AAPT01004257.1/151-220 7222:Drosophila grimshawi
Length = 70
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttgaggtagtaggttgtatagta 41
|||||||||||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagta 28
>RF00027;let-7;AANI01016295.1/2335-2404 7244:Drosophila virilis
Length = 70
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttgaggtagtaggttgtatagta 41
|||||||||||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagta 28
>RF00027;let-7;AAPU01010514.1/89793-89724 7230:Drosophila
mojavensis
Length = 70
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttgaggtagtaggttgtatagta 41
|||||||||||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagta 28
>RF00027;let-7;AAJJ01000960.1/12168-12093 7070:Tribolium castaneum
(red flour beetle)
Length = 76
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttgaggtagtaggttgtatagta 41
|||||||||||||||||||||||
Sbjct: 6 ttgaggtagtaggttgtatagta 28
>RF00027;let-7;ABKP02019321.1/4252-4323 377271:Anopheles gambiae M
Length = 72
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 tgttgaggtagtaggttgtatagtac 42
|||||||||||| |||||||||||||
Sbjct: 4 tgttgaggtagttggttgtatagtac 29
