miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00832;mir-71;AADK01011192.1/8467-8525 7091:Bombyx mori
          (domestic silkworm)
          Length = 59

 Score =  117 bits (59), Expect = 3e-26
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                     
Query: 21 tgaaagacatgggtagtgagatgtcccgtacatctaaaattctcactaccttgtctttc 79
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagatgtcccgtacatctaaaattctcactaccttgtctttc 59




>RF00832;mir-71;AASC02030054.1/9912-9965 6500:Aplysia californica
          (California sea hare)
          Length = 54

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 21 tgaaagacatgggtagtgagatgt 44
          ||||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagatgt 24




>RF00832;mir-71;AAZO01007079.1/39885-39949 121224:Pediculus
          humanus corporis (human body louse)
          Length = 65

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 21 tgaaagacatgggtagtgagatgt 44
          ||||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagatgt 24




>RF00832;mir-71;AADG05000005.1/24640-24697 7460:Apis mellifera
          (honey bee)
          Length = 58

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 21 tgaaagacatgggtagtgagatgt 44
          ||||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagatgt 24




>RF00832;mir-71;AAJJ01001714.1/2180-2239 7070:Tribolium castaneum
          (red flour beetle)
          Length = 60

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 21 tgaaagacatgggtagtgagatgt 44
          ||||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagatgt 24




>RF00832;mir-71;ABLF01009126.1/5038-4980 7029:Acyrthosiphon pisum
          (pea aphid)
          Length = 59

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgaaagacatgggtagtgagatg 43
          |||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagatg 23




>RF00832;mir-71;AAZX01013101.1/18156-18214 7425:Nasonia
          vitripennis (jewel wasp)
          Length = 59

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgaaagacatgggtagtgagatg 43
          |||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagatg 23




>RF00832;mir-71;ABJB010692301.1/11781-11722 6945:Ixodes scapularis
          (black-legged tick)
          Length = 60

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgaaagacatgggtagtgagatg 43
          |||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagatg 23




>RF00832;mir-71;AAWT01093310.1/38829-38766 79327:Schmidtea
          mediterranea
          Length = 64

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgaaagacatgggtagtgagat 42
          ||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagat 22




>RF00832;mir-71;AAGJ02037127.1/41214-41272 7668:Strongylocentrotus
          purpuratus
          Length = 59

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgaaagacatgggtagtgagat 42
          ||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagat 22




>RF00832;mir-71;ABEP02027218.1/11123-11067 7739:Branchiostoma
          floridae (Florida lancelet)
          Length = 57

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgaaagacatgggtagtgagat 42
          ||||||||||||||||||||||
Sbjct: 1  tgaaagacatgggtagtgagat 22