miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00950;mir-927;AADK01018362.1/2317-2241 7091:Bombyx mori
(domestic silkworm)
Length = 77
Score = 153 bits (77), Expect = 4e-37
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 6 cctttttgctttagaattcctacgctttaccgttgccaagtagttgggcaaagcgtttgg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctttttgctttagaattcctacgctttaccgttgccaagtagttgggcaaagcgtttgg 60
Query: 66 attctaaaacgaaataa 82
|||||||||||||||||
Sbjct: 61 attctaaaacgaaataa 77
>RF00950;mir-927;AAIZ01011894.1/48584-48662 7234:Drosophila
persimilis
Length = 79
Score = 63.9 bits (32), Expect = 3e-10
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgttgccaa--gtagttgggcaaagcgtttggattctaa 72
||||||||||||||||||||||||||| || | | || ||||||||||||||||||| |
Sbjct: 10 tttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttggattctga 69
Query: 73 aac 75
|||
Sbjct: 70 aac 72
>RF00950;mir-927;AAGE02001795.1/170457-170536 7159:Aedes aegypti
(yellow fever mosquito)
Length = 80
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 10 tttgctttagaattcctacgctttaccgt 38
|||||||||||||||||||||||||||||
Sbjct: 5 tttgctttagaattcctacgctttaccgt 33
>RF00950;mir-927;ABKP02022054.1/6557-6479 377271:Anopheles gambiae
M
Length = 79
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 10 tttgctttagaattcctacgctttaccgttgcc--aagtagttgggcaaagcgtttggat 67
|||| |||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 5 tttgttttagaattcctacgctttacccgtgattaaagtagtgcggcaaagcgtttggat 64
Query: 68 tctaaaacgaaa 79
||| ||||||||
Sbjct: 65 tctgaaacgaaa 76
>RF00950;mir-927;AAPP01018483.1/24548-24625 7217:Drosophila
ananassae
Length = 78
Score = 58.0 bits (29), Expect = 2e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgttgc-caagtagttgggcaaagcgtttggattct 70
||||||||||||||||||||||||||| | | | || |||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttaccgttgcatatgaaattaggcaaagcgtttggattct 66
>RF00950;mir-927;AAQB01006885.1/24835-24758 7260:Drosophila
willistoni
Length = 78
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgttgcc-aagtagttgggcaaagcgtttggattctaaa 73
|||||||||||||||||||||||| ||| | | | | ||||||||||||||||||| ||
Sbjct: 10 tttagaattcctacgctttaccgtcgcctacgaaactcggcaaagcgtttggattctgaa 69
Query: 74 ac 75
||
Sbjct: 70 ac 71
>RF00950;mir-927;AABU01002771.1/5147485-5147408 7227:Drosophila
melanogaster (fruit fly)
Length = 78
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgttgc-caagtagttgggcaaagcgtttggattctaaa 73
|||||||||||||||||||||||| || | | | || ||||||||||||||||||| ||
Sbjct: 10 tttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttggattctgaa 69
Query: 74 ac 75
||
Sbjct: 70 ac 71
>RF00950;mir-927;ABLF01004627.1/10448-10374 7029:Acyrthosiphon
pisum (pea aphid)
Length = 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgt 38
||||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttaccgt 33
>RF00950;mir-927;AAZX01009215.1/528-602 7425:Nasonia vitripennis
(jewel wasp)
Length = 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 tttgctttagaattcctacgctttaccg 37
|||| |||||||||||||||||||||||
Sbjct: 5 tttgttttagaattcctacgctttaccg 32
>RF00950;mir-927;AADG05003208.1/18292-18365 7460:Apis mellifera
(honey bee)
Length = 74
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 tttgctttagaattcctacgctttaccg 37
|||| |||||||||||||||||||||||
Sbjct: 5 tttgttttagaattcctacgctttaccg 32
>RF00950;mir-927;AAPU01009479.1/6269-6192 7230:Drosophila
mojavensis
Length = 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgt 38
||||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttaccgt 33
>RF00950;mir-927;AAJJ01000142.1/38253-38326 7070:Tribolium
castaneum (red flour beetle)
Length = 74
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttaccgt 38
||||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttaccgt 33
>RF00950;mir-927;AAZO01006968.1/5753-5674 121224:Pediculus humanus
corporis (human body louse)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tttagaattcctacgctttacc 36
||||||||||||||||||||||
Sbjct: 10 tttagaattcctacgctttacc 31
