miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00947;mir-929;BAAB01013302.1/660-751 7091:Bombyx mori (domestic
silkworm)
Length = 92
Score = 159 bits (80), Expect = 7e-39
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgttaaattgactctagtagggagtccgttccgcgcgactccctaatcgagtcaggttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tgttaaattgactctagtagggagtccgttccgcgcgactccctaatcgagtcaggttga 72
Query: 61 cttctttgatgctaaatcga 80
||||||||||||||||||||
Sbjct: 73 cttctttgatgctaaatcga 92
>RF00947;mir-929;AANI01014363.1/204913-205006 7244:Drosophila
virilis
Length = 94
Score = 58.0 bits (29), Expect = 2e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtccgttc-cgcgcgactccctaatcgagtcaggttga 60
||||||||||||||||||||||| ||| || |||||||||||| ||||||| ||||
Sbjct: 17 aaattgactctagtagggagtcctttcacgagcgactccctaacggagtcagattga 73
>RF00947;mir-929;AAJJ01001068.1/14929-15025 7070:Tribolium
castaneum (red flour beetle)
Length = 97
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtccgtt 30
||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccgtt 42
>RF00947;mir-929;ABKP02012769.1/7854-7759 377271:Anopheles gambiae
M
Length = 96
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttaaattgactctagtagggagtcc 27
|||||||||||||||||||||||||
Sbjct: 15 ttaaattgactctagtagggagtcc 39
>RF00947;mir-929;AAAB01008089.1/34548-34645 180454:Anopheles
gambiae str. PEST
Length = 98
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ttaaattgactctagtagggagtcc 27
|||||||||||||||||||||||||
Sbjct: 15 ttaaattgactctagtagggagtcc 39
>RF00947;mir-929;AAZO01002930.1/51339-51440 121224:Pediculus
humanus corporis (human body louse)
Length = 102
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;ABLF01011736.1/10860-10764 7029:Acyrthosiphon
pisum (pea aphid)
Length = 97
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;AAZX01003135.1/832-932 7425:Nasonia vitripennis
(jewel wasp)
Length = 101
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;AADG05005366.1/7427-7326 7460:Apis mellifera
(honey bee)
Length = 102
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;AAWU01005610.1/5708-5613 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 96
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;AAGE02012461.1/76734-76639 7159:Aedes aegypti
(yellow fever mosquito)
Length = 96
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;AAQB01008629.1/27335-27241 7260:Drosophila
willistoni
Length = 95
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;AAFS01002785.1/3282-3188 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;AABU01002551.1/121293-121386 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;AAPU01011179.1/143817-143911 7230:Drosophila
mojavensis
Length = 95
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aaattgactctagtagggagtcc 27
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
