miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00950;mir-927;AADK01018362.1/2317-2241 7091:Bombyx mori
(domestic silkworm)
Length = 77
Score = 153 bits (77), Expect = 5e-37
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 8 ttatttcgttttagaatccaaacgctttgcccaactacttggcaacggtaaagcgtagga 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 ttatttcgttttagaatccaaacgctttgcccaactacttggcaacggtaaagcgtagga 18
Query: 68 attctaaagcaaaaagg 84
|||||||||||||||||
Sbjct: 17 attctaaagcaaaaagg 1
>RF00950;mir-927;AAIZ01011894.1/48584-48662 7234:Drosophila
persimilis
Length = 79
Score = 63.9 bits (32), Expect = 3e-10
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Minus
Query: 15 gttttagaatccaaacgctttgcccaactac--ttggcaacggtaaagcgtaggaattct 72
|||| ||||||||||||||||||| || | | || ||||||||||||||||||||||||
Sbjct: 72 gtttcagaatccaaacgctttgccgaatttcgttttgcaacggtaaagcgtaggaattct 13
Query: 73 aaa 75
|||
Sbjct: 12 aaa 10
>RF00950;mir-927;AAGE02001795.1/170457-170536 7159:Aedes aegypti
(yellow fever mosquito)
Length = 80
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 52 acggtaaagcgtaggaattctaaagcaaa 80
|||||||||||||||||||||||||||||
Sbjct: 33 acggtaaagcgtaggaattctaaagcaaa 5
>RF00950;mir-927;ABKP02022054.1/6557-6479 377271:Anopheles gambiae
M
Length = 79
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 11 tttcgttttagaatccaaacgctttgcccaactactt--ggcaacggtaaagcgtaggaa 68
|||||||| ||||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 76 tttcgtttcagaatccaaacgctttgccgcactactttaatcacgggtaaagcgtaggaa 17
Query: 69 ttctaaagcaaa 80
||||||| ||||
Sbjct: 16 ttctaaaacaaa 5
>RF00950;mir-927;AAPP01018483.1/24548-24625 7217:Drosophila
ananassae
Length = 78
Score = 58.0 bits (29), Expect = 2e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 20 agaatccaaacgctttgcccaactacttg-gcaacggtaaagcgtaggaattctaaa 75
||||||||||||||||||| || | | | |||||||||||||||||||||||||||
Sbjct: 66 agaatccaaacgctttgcctaatttcatatgcaacggtaaagcgtaggaattctaaa 10
>RF00950;mir-927;AAQB01006885.1/24835-24758 7260:Drosophila
willistoni
Length = 78
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 15 gttttagaatccaaacgctttgcccaactactt-ggcaacggtaaagcgtaggaattcta 73
|||| ||||||||||||||||||| | | | | ||| ||||||||||||||||||||||
Sbjct: 71 gtttcagaatccaaacgctttgccgagtttcgtaggcgacggtaaagcgtaggaattcta 12
Query: 74 aa 75
||
Sbjct: 11 aa 10
>RF00950;mir-927;AABU01002771.1/5147485-5147408 7227:Drosophila
melanogaster (fruit fly)
Length = 78
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 15 gttttagaatccaaacgctttgcccaactacttg-gcaacggtaaagcgtaggaattcta 73
|||| ||||||||||||||||||| || | | | || ||||||||||||||||||||||
Sbjct: 71 gtttcagaatccaaacgctttgccgaatttcgtatgccacggtaaagcgtaggaattcta 12
Query: 74 aa 75
||
Sbjct: 11 aa 10
>RF00950;mir-927;ABLF01004627.1/10448-10374 7029:Acyrthosiphon
pisum (pea aphid)
Length = 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 52 acggtaaagcgtaggaattctaaa 75
||||||||||||||||||||||||
Sbjct: 33 acggtaaagcgtaggaattctaaa 10
>RF00950;mir-927;AAZX01009215.1/528-602 7425:Nasonia vitripennis
(jewel wasp)
Length = 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 53 cggtaaagcgtaggaattctaaagcaaa 80
||||||||||||||||||||||| ||||
Sbjct: 32 cggtaaagcgtaggaattctaaaacaaa 5
>RF00950;mir-927;AADG05003208.1/18292-18365 7460:Apis mellifera
(honey bee)
Length = 74
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 53 cggtaaagcgtaggaattctaaagcaaa 80
||||||||||||||||||||||| ||||
Sbjct: 32 cggtaaagcgtaggaattctaaaacaaa 5
>RF00950;mir-927;AAPU01009479.1/6269-6192 7230:Drosophila
mojavensis
Length = 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 52 acggtaaagcgtaggaattctaaa 75
||||||||||||||||||||||||
Sbjct: 33 acggtaaagcgtaggaattctaaa 10
>RF00950;mir-927;AAJJ01000142.1/38253-38326 7070:Tribolium
castaneum (red flour beetle)
Length = 74
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 52 acggtaaagcgtaggaattctaaa 75
||||||||||||||||||||||||
Sbjct: 33 acggtaaagcgtaggaattctaaa 10
>RF00950;mir-927;AAZO01006968.1/5753-5674 121224:Pediculus humanus
corporis (human body louse)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 ggtaaagcgtaggaattctaaa 75
||||||||||||||||||||||
Sbjct: 31 ggtaaagcgtaggaattctaaa 10
