miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01913;mir-2778;BAAB01014696.1/124-223 7091:Bombyx mori
          (domestic silkworm)
          Length = 100

 Score =  103 bits (52), Expect = 3e-22
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1  cacggcaaaagttattttgcatatcctgcacagtttcagttctcgcagagtacgcnnnnn 60
          ||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
Sbjct: 14 cacggcaaaagtttttttgcatatcctgcacagtttcagttctcgcagagtacgcaaaaa 73

                           
Query: 61 nncaattttgacgtgag 77
            |||||||||||||||
Sbjct: 74 aacaattttgacgtgag 90




>RF01913;mir-2778;BABH01025810.1/426-525 7091:Bombyx mori
          (domestic silkworm)
          Length = 100

 Score =  101 bits (51), Expect = 1e-21
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                 
Query: 1  cacggcaaaagttattttgcatatcctgcacagtttcagttctcgcagagtacgc 55
          ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 cacggcaaaagtttttttgcatatcctgcacagtttcagttctcgcagagtacgc 68