miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00027;let-7;AAWU01000327.1/4832-4903 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 72
Score = 143 bits (72), Expect = 4e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 10 ccacgttgaggtagttggttgtatagtattaaaaattcaatatctactatgcaatccgct 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacgttgaggtagttggttgtatagtattaaaaattcaatatctactatgcaatccgct 60
Query: 70 agcttaacttgt 81
||||||||||||
Sbjct: 61 agcttaacttgt 72
>RF00027;let-7;AAGE02002929.1/321613-321685 7159:Aedes aegypti
(yellow fever mosquito)
Length = 73
Score = 60.0 bits (30), Expect = 5e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 10 ccacgttgaggtagttggttgtatagta-ttaaaaattcaatatctactatgcaatccgc 68
|||||||||||||||||||||||||||| | | ||| ||||||| |||||||||| ||
Sbjct: 1 ccacgttgaggtagttggttgtatagtagtgactgattaaatatctgctatgcaatctgc 60
Query: 69 tagctt 74
||||||
Sbjct: 61 tagctt 66
>RF00027;let-7;ABKP02019321.1/4252-4323 377271:Anopheles gambiae M
Length = 72
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gttgaggtagttggttgtatagta 37
||||||||||||||||||||||||
Sbjct: 5 gttgaggtagttggttgtatagta 28
>RF00027;let-7;ABLF01019923.1/2377-2307 7029:Acyrthosiphon pisum
(pea aphid)
Length = 71
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tgaggtagttggttgtatagta 37
||||||||||||||||||||||
Sbjct: 7 tgaggtagttggttgtatagta 28
