miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00726;mir-87;AAPU01010611.1/255409-255311 7230:Drosophila
mojavensis
Length = 99
Score = 159 bits (80), Expect = 8e-39
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 5 tttcattcgcgcctgtatcttgctgaaccgttaccattgtgacatccaaatccggttgag 64
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 6 tttcattcgcgcctgtatcttgctgaaccgttacaattgtcacatccaaatccggttgag 65
Query: 65 caaaatttcaggtgtgtgagaaatttgt 92
||||||||||||||||||||||||||||
Sbjct: 66 caaaatttcaggtgtgtgagaaatttgt 93
>RF00726;mir-87;AAQB01006452.1/3553-3454 7260:Drosophila
willistoni
Length = 100
Score = 123 bits (62), Expect = 4e-28
Identities = 89/94 (94%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttacca-ttgtga-catccaaatccg 58
|||||||||||||||||||||||||||||||||||||||| |||||| |||| | ||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcatc-atttccg 60
Query: 59 gttgagcaaaatttcaggtgtgtgagaaatttgt 92
||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgagcaaaatttcaggtgtgtgagaaatttgt 94
>RF00726;mir-87;AAPP01015726.1/103266-103169 7217:Drosophila
ananassae
Length = 98
Score = 119 bits (60), Expect = 6e-27
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttaccattgtgacatccaaatccggt 60
||||||||||||||||||||||||||||||||||||||| | || || | ||||||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccgatatggca-cagaatccggt 60
Query: 61 tgagcaaaatttcaggtgtgtgagaaatttgt 92
||||||||||||||||||||||||||||||||
Sbjct: 61 tgagcaaaatttcaggtgtgtgagaaatttgt 92
>RF00726;mir-87;AASW01042897.1/1205-1302 7240:Drosophila simulans
Length = 98
Score = 91.7 bits (46), Expect = 1e-18
Identities = 78/87 (89%), Gaps = 5/87 (5%)
Strand = Plus / Plus
Query: 4 atttcattcgcgcctgtatcttgctgaaccgttaccattgtgacatccaa--atccggtt 61
||||||||||||||||||||||||||||||| | ||||| || | ||| ||||||||
Sbjct: 5 atttcattcgcgcctgtatcttgctgaaccgctgccattatggc---caacgatccggtt 61
Query: 62 gagcaaaatttcaggtgtgtgagaaat 88
|||||||||||||||||||||||||||
Sbjct: 62 gagcaaaatttcaggtgtgtgagaaat 88
>RF00726;mir-87;AADE01000150.1/47415-47513 46245:Drosophila
pseudoobscura pseudoobscura
Length = 99
Score = 87.7 bits (44), Expect = 2e-17
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttaccattgtgacatccaaatccggt 60
||||||||||||||||||||||||||||||||||| |||| || | | |||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggt 61
Query: 61 tgagcaaaatttcaggtgtgtgagaaatttgt 92
||||||||||||||||||||||||||||||||
Sbjct: 62 tgagcaaaatttcaggtgtgtgagaaatttgt 93
