miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00464;mir-92;AAPU01011126.1/203266-203187 7230:Drosophila
mojavensis
Length = 80
Score = 135 bits (68), Expect = 1e-31
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 4 aattgcttgcaggacgggaaggtgtcaacgttttgcattttgaatcaaacattgcacttg 63
|||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||
Sbjct: 1 aattgcttgcaggacgggaaggtgtcaacgttttaccttttgattcaaacattgcacttg 60
Query: 64 tcccggcctatgagcggttt 83
||||||||||||||||||||
Sbjct: 61 tcccggcctatgagcggttt 80
>RF00464;mir-92;AABU01002774.1/17891638-17891716 7227:Drosophila
melanogaster (fruit fly)
Length = 79
Score = 107 bits (54), Expect = 2e-23
Identities = 67/70 (95%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 14 aggacgggaaggtgtcaacgttttgcattttgaatcaaacattgcacttgtcccggccta 73
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 11 aggacgggaaggtgtcaacgttttgcatttcgaat-aaacattgcacttgtcccggccta 69
Query: 74 tgagcggttt 83
|| |||||||
Sbjct: 70 tgggcggttt 79
>RF00464;mir-92;AASS01038642.1/1728-1802 7240:Drosophila simulans
Length = 75
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 51 aacattgcacttgtcccggcctatgagcggtt 82
||||||||||||||||||||||||| ||||||
Sbjct: 43 aacattgcacttgtcccggcctatgggcggtt 74
>RF00464;mir-92;ABRQ01318667.1/1002-921 9813:Procavia capensis
(cape rock hyrax)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 attgcacttgtcccggcctatg 75
||||||||||||||||||||||
Sbjct: 53 attgcacttgtcccggcctatg 74
>RF00464;mir-92;AAWU01030066.1/31253-31174 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 attgcacttgtcccggcctatg 75
||||||||||||||||||||||
Sbjct: 51 attgcacttgtcccggcctatg 72
>RF00464;mir-92;AAGE02006821.1/67754-67834 7159:Aedes aegypti
(yellow fever mosquito)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 attgcacttgtcccggcctatg 75
||||||||||||||||||||||
Sbjct: 52 attgcacttgtcccggcctatg 73
>RF00464;mir-92;AAAB01007923.1/22644-22568 180454:Anopheles
gambiae str. PEST
Length = 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 attgcacttgtcccggcctatg 75
||||||||||||||||||||||
Sbjct: 48 attgcacttgtcccggcctatg 69
