miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00727;bantam;AANI01017339.1/10975-11064 7244:Drosophila virilis
Length = 90
Score = 153 bits (77), Expect = 4e-37
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactgtatttcatacaagtgagatcat 60
Query: 61 tttgaaagctgattttgtcaa 81
|||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81
>RF00727;bantam;AAPU01011505.1/2277-2366 7230:Drosophila
mojavensis
Length = 90
Score = 139 bits (70), Expect = 6e-33
Identities = 80/82 (97%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 atttgactacgaaaccggttttcgatttggtttgactg-tttttcatacaagtgagatca 59
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1 atttgactacgaaaccggttttcgatttggtttgactgtttttttatacaagtgagatca 60
Query: 60 ttttgaaagctgattttgtcaa 81
||||||||||||||||||||||
Sbjct: 61 ttttgaaagctgattttgtcaa 82
>RF00727;bantam;AAWU01005949.1/119500-119406 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 95
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 agtgagatcattttgaaagctgattttgt 78
|||||||||||||||||||||||||||||
Sbjct: 54 agtgagatcattttgaaagctgattttgt 82
>RF00727;bantam;AAGE02003301.1/208408-208314 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 agtgagatcattttgaaagctgattttgt 78
|||||||||||||||||||||||||||||
Sbjct: 55 agtgagatcattttgaaagctgattttgt 83
>RF00727;bantam;AAAB01008879.1/1730921-1731017 180454:Anopheles
gambiae str. PEST
Length = 97
Score = 56.0 bits (28), Expect = 7e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 47 acaagtgagatcattttgaaagctgattttgt 78
||||||||||||| ||||||||||||||||||
Sbjct: 53 acaagtgagatcactttgaaagctgattttgt 84
>RF00727;bantam;AAZO01005717.1/66950-67042 121224:Pediculus
humanus corporis (human body louse)
Length = 93
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgagatcattttgaaagctgattttgt 78
|||||||||| ||||||||||||||||
Sbjct: 55 tgagatcattgtgaaagctgattttgt 81
>RF00727;bantam;AAZX01004974.1/17134-17222 7425:Nasonia
vitripennis (jewel wasp)
Length = 89
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgagatcattttgaaagctgattttgt 78
|||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78
>RF00727;bantam;AADG05005002.1/2155-2243 7460:Apis mellifera
(honey bee)
Length = 89
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgagatcattttgaaagctgattttgt 78
|||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78
>RF00727;bantam;AAJJ01000881.1/39195-39283 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgagatcattttgaaagctgattttgt 78
|||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78
>RF00727;bantam;ABJB010305858.1/1270-1184 6945:Ixodes scapularis
(black-legged tick)
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgagatcattttgaaagctgattttgt 78
|||||||||| ||||||||||||||||
Sbjct: 53 tgagatcattgtgaaagctgattttgt 79
