miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00661;mir-31;AAZX01004302.1/23296-23375 7425:Nasonia
vitripennis (jewel wasp)
Length = 80
Score = 137 bits (69), Expect = 2e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 gaaggcaagatgtcggcatagctgatgcttttgaaatttcggctgtgtcacatccagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gaaggcaagatgtcggcatagctgatgcttttgaaatttcggctgtgtcacatccagcca 71
Query: 61 gccaaacgc 69
|||||||||
Sbjct: 72 gccaaacgc 80
>RF00661;mir-31;AADG05006757.1/17977-18057 7460:Apis mellifera
(honey bee)
Length = 81
Score = 83.8 bits (42), Expect = 3e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 gaaggcaagatgtcggcatagctgatgc-ttttgaaatttcggctgtgtcacatccagcc 59
|||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||
Sbjct: 12 gaaggcaagatgtcggcatagctgatgcgattttaaaattcggctgtgtcacatccagcc 71
Query: 60 agccaaacgc 69
| || |||||
Sbjct: 72 aaccgaacgc 81
>RF00661;mir-31;AAZO01004538.1/561-481 121224:Pediculus humanus
corporis (human body louse)
Length = 81
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 aggcaagatgtcggcatagctga 25
|||||||||||||||||||||||
Sbjct: 14 aggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAQB01006276.1/72264-72183 7260:Drosophila
willistoni
Length = 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 ggcaagatgtcggcatagctgat 26
|||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctgat 37
>RF00661;mir-31;AAJJ01000269.1/62248-62171 7070:Tribolium
castaneum (red flour beetle)
Length = 78
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 aggcaagatgtcggcatagctga 25
|||||||||||||||||||||||
Sbjct: 14 aggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAPQ01007042.1/187291-187204 7220:Drosophila
erecta
Length = 88
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggcaagatgtcggcatagctga 25
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAIZ01001980.1/15086-15173 7234:Drosophila
persimilis
Length = 88
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggcaagatgtcggcatagctga 25
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAGH01011800.1/12196-12109 7240:Drosophila
simulans
Length = 88
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggcaagatgtcggcatagctga 25
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AANI01014909.1/166793-166706 7244:Drosophila
virilis
Length = 88
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggcaagatgtcggcatagctga 25
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAPU01010140.1/40129-40215 7230:Drosophila
mojavensis
Length = 87
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggcaagatgtcggcatagctga 25
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;ABKE01002614.1/3132-3048 54126:Pristionchus
pacificus
Length = 85
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 aggcaagatgtcggcatagctgatg 27
||||||||||| |||||||||||||
Sbjct: 14 aggcaagatgttggcatagctgatg 38
>RF00661;mir-31;AAWZ01002824.1/52915-52993 28377:Anolis
carolinensis (green anole)
Length = 79
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 aggcaagatgtcggcatagctgatg 27
||||||||||| |||||||||||||
Sbjct: 14 aggcaagatgttggcatagctgatg 38
