miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00727;bantam;AAZX01004974.1/17134-17222 7425:Nasonia
          vitripennis (jewel wasp)
          Length = 89

 Score =  172 bits (87), Expect = 5e-43
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atatagacgaaactggttttcacaatgatttgacagatgtatttgattctgagatcattg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3  atatagacgaaactggttttcacaatgatttgacagatgtatttgattctgagatcattg 62

                                     
Query: 61 tgaaagctgattttgttccgaattcag 87
          |||||||||||||||||||||||||||
Sbjct: 63 tgaaagctgattttgttccgaattcag 89




>RF00727;bantam;AAJJ01000881.1/39195-39283 7070:Tribolium
          castaneum (red flour beetle)
          Length = 89

 Score =  131 bits (66), Expect = 2e-30
 Identities = 72/74 (97%)
 Strand = Plus / Plus

                                                                      
Query: 5  agacgaaactggttttcacaatgatttgacagatgtatttgattctgagatcattgtgaa 64
          |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 7  agacgaaactggttttcacagtgatttgacagatatatttgattctgagatcattgtgaa 66

                        
Query: 65 agctgattttgttc 78
          ||||||||||||||
Sbjct: 67 agctgattttgttc 80




>RF00727;bantam;AADG05005002.1/2155-2243 7460:Apis mellifera
          (honey bee)
          Length = 89

 Score =  117 bits (59), Expect = 2e-26
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                      
Query: 7  acgaaactggttttcacaatgatttgacagatgtatttgattctgagatcattgtgaaag 66
          ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||
Sbjct: 9  acgaaactggttttcacaatgatttgacagatagattcgattctgagatcattgtgaaag 68

                     
Query: 67 ctgattttgtt 77
          |||||||||||
Sbjct: 69 ctgattttgtt 79




>RF00727;bantam;AAZO01005717.1/66950-67042 121224:Pediculus
          humanus corporis (human body louse)
          Length = 93

 Score = 93.7 bits (47), Expect = 3e-19
 Identities = 69/74 (93%), Gaps = 3/74 (4%)
 Strand = Plus / Plus

                                                                      
Query: 7  acgaaactggttttcacaatgatttgacagat-gtatttg--attctgagatcattgtga 63
          |||||||||||||||||||||||||| ||||| || ||||  ||||||||||||||||||
Sbjct: 9  acgaaactggttttcacaatgatttgccagatagtttttgttattctgagatcattgtga 68

                        
Query: 64 aagctgattttgtt 77
          ||||||||||||||
Sbjct: 69 aagctgattttgtt 82




>RF00727;bantam;AADK01008828.1/6468-6379 7091:Bombyx mori
          (domestic silkworm)
          Length = 90

 Score = 91.7 bits (46), Expect = 1e-18
 Identities = 68/74 (91%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  acgaaactggttttcacaatgatttgacagatgtatttg-attctgagatcattgtgaaa 65
          |||||||||||||||| |||||||||||||||   |||| ||||||||||||||||||||
Sbjct: 9  acgaaactggttttcataatgatttgacagattgttttgtattctgagatcattgtgaaa 68

                        
Query: 66 gctgattttgttcc 79
          ||| ||||||||||
Sbjct: 69 gctaattttgttcc 82




>RF00727;bantam;ABJB010305858.1/1270-1184 6945:Ixodes scapularis
          (black-legged tick)
          Length = 87

 Score = 60.0 bits (30), Expect = 5e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 48 tctgagatcattgtgaaagctgattttgtt 77
          ||||||||||||||||||||||||||||||
Sbjct: 51 tctgagatcattgtgaaagctgattttgtt 80




>RF00727;bantam;AASC02061937.1/7510-7417 6500:Aplysia californica
          (California sea hare)
          Length = 94

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 48 tctgagatcattgtgaaagctgattttgt 76
          |||||||||||||||||| ||||||||||
Sbjct: 54 tctgagatcattgtgaaaactgattttgt 82




>RF00727;bantam;ABLF01005214.1/5435-5342 7029:Acyrthosiphon pisum
          (pea aphid)
          Length = 94

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 46 attctgagatcattgtgaaagctgattt 73
          ||||||||||||||||||||||| ||||
Sbjct: 53 attctgagatcattgtgaaagctaattt 80




>RF00728;mir-81;AAQA01000482.1/18100-18000 6279:Brugia malayi
          Length = 101

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 42 tttgattctgagatcattgtgaaagct 68
          ||||| |||||||||||||||||||||
Sbjct: 55 tttgagtctgagatcattgtgaaagct 81




>RF00727;bantam;AAWU01005949.1/119500-119406 7176:Culex
          quinquefasciatus (southern house mosquito)
          Length = 95

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 50 tgagatcattgtgaaagctgattttgt 76
          |||||||||| ||||||||||||||||
Sbjct: 56 tgagatcattttgaaagctgattttgt 82




>RF00727;bantam;AAGE02003301.1/208408-208314 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 95

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 50 tgagatcattgtgaaagctgattttgt 76
          |||||||||| ||||||||||||||||
Sbjct: 57 tgagatcattttgaaagctgattttgt 83




>RF00727;bantam;AAPU01011505.1/2277-2366 7230:Drosophila
          mojavensis
          Length = 90

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 50 tgagatcattgtgaaagctgattttgt 76
          |||||||||| ||||||||||||||||
Sbjct: 53 tgagatcattttgaaagctgattttgt 79




>RF00727;bantam;AANI01017339.1/10975-11064 7244:Drosophila virilis
          Length = 90

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 50 tgagatcattgtgaaagctgattttgt 76
          |||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattttgaaagctgattttgt 78