miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00047;mir-2;AAZX01013101.1/18917-18986 7425:Nasonia vitripennis
(jewel wasp)
Length = 70
Score = 139 bits (70), Expect = 7e-33
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 13 tcgctcacaaagtggctgttgtatgtcggatttctttggctcatatcacagccagctttg 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgctcacaaagtggctgttgtatgtcggatttctttggctcatatcacagccagctttg 60
Query: 73 ttgagcggtg 82
||||||||||
Sbjct: 61 ttgagcggtg 70
>RF00047;mir-2;ABJB010692301.1/11251-11184 6945:Ixodes scapularis
(black-legged tick)
Length = 68
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 53 tcatatcacagccagctttgttgagcggtg 82
|||||||||||||||||||| |||||||||
Sbjct: 39 tcatatcacagccagctttgatgagcggtg 68
>RF00047;mir-2;BABH01007323.1/5662-5596 7091:Bombyx mori (domestic
silkworm)
Length = 67
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 tcatatcacagccagctttgttgag 77
|||||||||||||||||||||||||
Sbjct: 38 tcatatcacagccagctttgttgag 62
>RF00047;mir-2;AAJJ01001714.1/2663-2727 7070:Tribolium castaneum
(red flour beetle)
Length = 65
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 gctcatatcacagccagctttgttgagcg 79
|||||||||||||||||||||| ||||||
Sbjct: 34 gctcatatcacagccagctttgatgagcg 62
>RF00047;mir-2;AAZO01007079.1/41194-41254 121224:Pediculus humanus
corporis (human body louse)
Length = 61
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 53 tcatatcacagccagctttgttgagcgg 80
|||||||||||||||||||| |||||||
Sbjct: 32 tcatatcacagccagctttgatgagcgg 59
>RF00047;mir-2;BABH01007323.1/5785-5717 7091:Bombyx mori (domestic
silkworm)
Length = 69
Score = 48.1 bits (24), Expect = 2e-05
Identities = 60/68 (88%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 13 tcgctcacaaagtggctgttgtatgtcggattt-ctttggctcatatcacagccagcttt 71
||||||||||||||| ||| ||||| || ||| ||||||| ||||||||||||||||||
Sbjct: 1 tcgctcacaaagtggttgtcgtatg-cgtttttactttggc-catatcacagccagcttt 58
Query: 72 gttgagcg 79
| ||||||
Sbjct: 59 gatgagcg 66
>RF00047;mir-2;AAGE02012793.1/16205-16139 7159:Aedes aegypti
(yellow fever mosquito)
Length = 67
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 gctcatatcacagccagctttgttgagc 78
|||||||||||||||||||||| |||||
Sbjct: 36 gctcatatcacagccagctttgatgagc 63
>RF00047;mir-2;ABLF01009126.1/4189-4122 7029:Acyrthosiphon pisum
(pea aphid)
Length = 68
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tcatatcacagccagctttgttgagcg 79
|||||||||||||||||||| ||||||
Sbjct: 39 tcatatcacagccagctttgatgagcg 65
>RF00047;mir-2;AADG05000005.1/25868-25935 7460:Apis mellifera
(honey bee)
Length = 68
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tcatatcacagccagctttgttgagcg 79
|||||||||||||||||||| ||||||
Sbjct: 39 tcatatcacagccagctttgatgagcg 65
>RF00047;mir-2;AAAB01008807.1/11607145-11607220 180454:Anopheles
gambiae str. PEST
Length = 76
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 ctcatatcacagccagctttgttgagc 78
||||||||||||||||||||| |||||
Sbjct: 46 ctcatatcacagccagctttgatgagc 72
>RF00047;mir-2;AAJJ01001714.1/2814-2878 7070:Tribolium castaneum
(red flour beetle)
Length = 65
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 tcatatcacagccagctttgttgagcg 79
|||||||||||||||||||| ||||||
Sbjct: 36 tcatatcacagccagctttgatgagcg 62
>RF00047;mir-2;CAAC02000589.1/1009397-1009308 6238:Caenorhabditis
briggsae
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 47 tttggctcatatcacagccagctttg 72
||||| ||||||||||||||||||||
Sbjct: 55 tttggttcatatcacagccagctttg 80
>RF00047;mir-2;AASC02030054.1/10531-10596 6500:Aplysia californica
(California sea hare)
Length = 66
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 tcatatcacagccagctttgttgagc 78
|||||||||||||||||||| |||||
Sbjct: 37 tcatatcacagccagctttgatgagc 62