miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00047;mir-2;AADG05000005.1/25311-25372 7460:Apis mellifera
(honey bee)
Length = 62
Score = 77.8 bits (39), Expect = 2e-14
Identities = 59/65 (90%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 28 cgatacatcaaattggttgtggaatgtctcgtctttccatatcacagccattttgatgag 87
||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||
Sbjct: 1 cgatacatcaaattggttgtggaatgtttcgagt---catatcacagccattttgatgag 57
Query: 88 cttgg 92
|||||
Sbjct: 58 cttgg 62
>RF00047;mir-2;AAIZ01000548.1/11342-11275 7234:Drosophila
persimilis
Length = 68
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 catatcacagccattttgatgag 87
|||||||||||||||||||||||
Sbjct: 41 catatcacagccattttgatgag 63
>RF00047;mir-2;AE014297.2/11243334-11243266 7227:Drosophila
melanogaster (fruit fly)
Length = 69
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 catatcacagccattttgatgag 87
|||||||||||||||||||||||
Sbjct: 42 catatcacagccattttgatgag 64
>RF00047;mir-2;AAPU01011022.1/363976-364043 7230:Drosophila
mojavensis
Length = 68
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 catatcacagccattttgatgag 87
|||||||||||||||||||||||
Sbjct: 41 catatcacagccattttgatgag 63
>RF00047;mir-2;AAJJ01001714.1/2416-2480 7070:Tribolium castaneum
(red flour beetle)
Length = 65
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 atatcacagccattttgatgagcttgg 92
|||||||||||| ||||||||||||||
Sbjct: 39 atatcacagccactttgatgagcttgg 65
