miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;AC135313.13/36796-36697 3880:Medicago truncatula
(barrel medic)
Length = 100
Score = 176 bits (89), Expect = 3e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 agatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 agatttgagccaaagatgacttgccggcatgctgcctgaaaagcaagaagggtgttgttt 65
Query: 61 tgctggcagttgtcattggttcatgtttg 89
|||||||||||||||||||||||||||||
Sbjct: 66 tgctggcagttgtcattggttcatgtttg 94
>RF00645;MIR169_2;BABK01002592.1/3832-3946 34305:Lotus japonicus
Length = 115
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 atttgagccaaagatgacttgccggcatgc 32
||||||||||| ||||||||||||||||||
Sbjct: 8 atttgagccaaggatgacttgccggcatgc 37
>RF00645;MIR169_2;BABK01041096.1/153-266 34305:Lotus japonicus
Length = 114
Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 tgagccaaagatgacttgccggcatgc 32
|||||||| ||||||||||||||||||
Sbjct: 11 tgagccaaggatgacttgccggcatgc 37
>RF00645;MIR169_2;AC157504.2/27710-27818 3880:Medicago truncatula
(barrel medic)
Length = 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 atttgagccaaagatgacttgccggc 28
||||||||||| ||||||||||||||
Sbjct: 8 atttgagccaaggatgacttgccggc 33
>RF00645;MIR169_2;BABK01041096.1/428-555 34305:Lotus japonicus
Length = 128
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 atttgagccaaagatgacttgccggcatgc 32
||||||||||| ||||||||| ||||||||
Sbjct: 8 atttgagccaaggatgacttgtcggcatgc 37