miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;AC186138.3/102418-102528 3880:Medicago truncatula
           (barrel medic)
          Length = 111

 Score =  220 bits (111), Expect = 4e-57
 Identities = 111/111 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  agagtatatttgagccaggatgacttgccggcatttgctgtaaatgtagaagaatccctt 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agagtatatttgagccaggatgacttgccggcatttgctgtaaatgtagaagaatccctt 60

                                                              
Query: 71  ctcacaattaaggtgttgttggcgaggaatctaggctcatatttgctctct 121
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctcacaattaaggtgttgttggcgaggaatctaggctcatatttgctctct 111




>RF00645;MIR169_2;AC135313.13/38621-38703 3880:Medicago truncatula
          (barrel medic)
          Length = 83

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 18 atttgagccaggatgacttgccggcat 44
          ||||||||||||||| |||||||||||
Sbjct: 8  atttgagccaggatggcttgccggcat 34




>RF00645;MIR169_2;AM458937.2/4897-4993 29760:Vitis vinifera
          Length = 97

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 27 aggatgacttgccggcatttgctgtaa 53
          |||||||||||||||||||||| ||||
Sbjct: 18 aggatgacttgccggcatttgcagtaa 44